BAC Information

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BAC

Clone NameB6Ng01-349B14
Chromosome1 (Build37)
Map Location 166,725,508 - 166,726,677
singlet/doubletsinglet
Overlap genenone
Upstream geneKifap3, Scyl3, BC055324, 2810422O20Rik, Sele, Sell, Selp, F5, Slc19a2, 4930455F23Rik, Blzf1, Nme7, Atp1b1, LOC100040065
Downstream geneDpt, Xcl1, 1700029M03Rik, Tbx19, Sft2d2, Tiprl, Gpr161, Iqwd1, Brp44, Sacy, Ppia-ps1-1625, Mpzl1, Rcsd1, Creg1, Cd247
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-349B14.b
ACCGA130186
length1,161
definitionB6Ng01-349B14.b
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctatgaacatgcgtggaacatgtaaatcaaggaaatctccccaga
gaatcacttcacggagagggaccagaggcagctgctccactctgctcaga
aacacctgagaaagaccccctcaattgcctacctatccttccctcatctc
tcggcatgctgcccctctgccacgccccttcttactagcaaaccaggtat
ctggtagctgttctcctgcttagctctctaaaattatacggaaatccagg
cggagatttcaaaacacaaacgttgataagttaaaggaactcaaccttta
gatttctgcaaacctaggtgcctggattctttttatgttcttagtccgtc
ttttaattgggggtagaagcagatgatctgtcttcaggtctactgttaaa
atgtctaacgttcaggtagaagtgctattggtccatggagagagcagcgg
ggcgttatctctgcttcagcatctgcctgagctgctgaaagtggtccctt
cagctctggcttaagtatggaactggttaagctcaaatgaatggtaagtt
ttttcagctggcactttcaaactttacattgacttttctgtttgttgagg
tgaagtgtataaaataaaggccagcttttcaactgtgtagcatacagtcc
tgcaggcagctctgaaatcatgctatagagtagactggatagtccagagc
acctcctcatagccctctgcatcctctttgttcccgatacctagttctgc
tacccaacaatcggatgttcgtctctacagttttgcctgttccagattgt
taataactggggtcacaccacacgggtcagtctctgttacccctgctttt
gagactcgactgtgctgccagtcactgacctcttgtaattgctgagaagg
gttccacagtatgggtgtcctgttcaatggtatcatctgaagcacgtgtg
gaatatctcattttgtaaaatttatatataactatgcataagtgcttacg
aattaaaatttctataagtgcacagaggttttcgtataaagctcttcttc
atttgctcagttaatactcatgactgatttcaggtgctatgtagagttct
gtcaaacttaaagaggctgtctgtgctatggcaacagaaacttatctttc
tttaattttgg
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_166725508_166726677
seq2: B6Ng01-349B14.b_43_1203 (reverse)

seq1  CCAAAATGTAAAAGAAAGGATAATTTTCTGGTGCCATAGCACAGACAGCT  50
      ||||||  | ||||||| ||||| |||||| |||||||||||||||||| 
seq2  CCAAAA--TTAAAGAAA-GATAAGTTTCTGTTGCCATAGCACAGACAGCC  47

seq1  TCTTTTAAAGTTTGACAG-ACTCTTACATAGCAACCTGGAAATCAGTCAT  99
      |||||  ||||||||||| |||| |||||||| |||| ||||||||||||
seq2  TCTTT--AAGTTTGACAGAACTC-TACATAGC-ACCT-GAAATCAGTCAT  92

seq1  GAGTATTTACTGAAGCAAAATGAAGAAGAAGCTTTATACGAAAACCTCTG  149
      ||||||| |||| ||| ||||||||||| |||||||||||||||||||||
seq2  GAGTATTAACTG-AGC-AAATGAAGAAG-AGCTTTATACGAAAACCTCTG  139

seq1  TGCACTTATAGAAATTTT-ATTCGTAAGCACTTATGCATAGTTATATATA  198
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  TGCACTTATAGAAATTTTAATTCGTAAGCACTTATGCATAGTTATATATA  189

seq1  AATTTTTACAAATGAGATATTCCACACGTGCTTCAGATGATACCATTGAA  248
      ||||||   |||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTACAAAATGAGATATTCCACACGTGCTTCAGATGATACCATTGAA  239

seq1  CAGGACACCCATACTGTGGAACCCTTCTCAGCAATTACAAGAGGTCAGTG  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGACACCCATACTGTGGAACCCTTCTCAGCAATTACAAGAGGTCAGTG  289

seq1  ACTGGCAGCACAGTCGAGTCTCAAAAGCAGGGGTAACAGAGACTGACCCG  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGCAGCACAGTCGAGTCTCAAAAGCAGGGGTAACAGAGACTGACCCG  339

seq1  TGTGGTGTGACCCCAGTTATTAACAATCTGGAACAGGCAAAACTGTAGAG  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGTGTGACCCCAGTTATTAACAATCTGGAACAGGCAAAACTGTAGAG  389

seq1  ACGAACATCCGATTGTTGGGTAGCAGAACTAGGTATCGGGAACAAAGAGG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGAACATCCGATTGTTGGGTAGCAGAACTAGGTATCGGGAACAAAGAGG  439

seq1  ATGCAGAGGGCTATGAGGAGGTGCTCTGGACTATCCAGTCTACTCTATAG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAGAGGGCTATGAGGAGGTGCTCTGGACTATCCAGTCTACTCTATAG  489

seq1  CATGATTTCAGAGCTGCCTGCAGGACTGTATGCTACACAGTTGAAAAGCT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGATTTCAGAGCTGCCTGCAGGACTGTATGCTACACAGTTGAAAAGCT  539

seq1  GGCCTTTATTTTATACACTTCACCTCAACAAACAGAAAAGTCAATGTAAA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTTTATTTTATACACTTCACCTCAACAAACAGAAAAGTCAATGTAAA  589

seq1  GTTTGAAAGTGCCAGCTGAAAAAACTTACCATTCATTTGAGCTTAACCAG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGAAAGTGCCAGCTGAAAAAACTTACCATTCATTTGAGCTTAACCAG  639

seq1  TTCCATACTTAAGCCAGAGCTGAAGGGACCACTTTCAGCAGCTCAGGCAG  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCATACTTAAGCCAGAGCTGAAGGGACCACTTTCAGCAGCTCAGGCAG  689

seq1  ATGCTGAAGCAGAGATAACGCCCCGCTGCTCTCTCCATGGACCAATAGCA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTGAAGCAGAGATAACGCCCCGCTGCTCTCTCCATGGACCAATAGCA  739

seq1  CTTCTACCTGAACGTTAGACATTTTAACAGTAGACCTGAAGACAGATCAT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTACCTGAACGTTAGACATTTTAACAGTAGACCTGAAGACAGATCAT  789

seq1  CTGCTTCTACCCCCAATTAAAAGACGGACTAAGAACATAAAAAGAATCCA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTTCTACCCCCAATTAAAAGACGGACTAAGAACATAAAAAGAATCCA  839

seq1  GGCACCTAGGTTTGCAGAAATCTAAAGGTTGAGTTCCTTTAACTTATCAA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACCTAGGTTTGCAGAAATCTAAAGGTTGAGTTCCTTTAACTTATCAA  889

seq1  CGTTTGTGTTTTGAAATCTCCGCCTGGATTTCCGTATAATTCTAGAGAGC  948
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  CGTTTGTGTTTTGAAATCTCCGCCTGGATTTCCGTATAATTTTAGAGAGC  939

seq1  TAAGCAGGAGAACAGCTACCAGATACCTGGTTTGCTAGTAAGAAGGGGCG  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCAGGAGAACAGCTACCAGATACCTGGTTTGCTAGTAAGAAGGGGCG  989

seq1  TGGCAGAGGGGCAGCATGCCGAGAGATGAGGGAAGGATAGGTAGGCAATT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCAGAGGGGCAGCATGCCGAGAGATGAGGGAAGGATAGGTAGGCAATT  1039

seq1  GAGGGGGTCTTTCTCAGGTGTTTCTGAGCAGAGTGGAGCAGCTGCCTCTG  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGGGTCTTTCTCAGGTGTTTCTGAGCAGAGTGGAGCAGCTGCCTCTG  1089

seq1  GTCCCTCTCCGTGAAGTGATTCTCTGGGGAGATTTCCTTGATTTACATGT  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCTCTCCGTGAAGTGATTCTCTGGGGAGATTTCCTTGATTTACATGT  1139

seq1  TCCTTGCATGTTCATAGAATTC  1170
      |||  |||||||||||||||||
seq2  TCCACGCATGTTCATAGAATTC  1161