BAC Information

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BAC

Clone NameB6Ng01-350D23
Chromosome1 (Build37)
Map Location 151,406,531 - 151,407,691
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100042792, LOC435647
Downstream geneLOC100042813, Pla2g4a, Ptgs2, LOC676712, LOC100043257, LOC100043261, Pdc, BC003331, Tpr, EG625534
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-350D23.bB6Ng01-350D23.g
ACCGA130978GA130979
length1,0191,148
definitionB6Ng01-350D23.b B6Ng01-350D23.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcatcacaatctgagcaagatgtaaactctaagagagaaggtgtct
atatgctaaggtctgcactttgtccacacagaacagggcattataaataa
gcaaatatattaatgataatggatggctgcttctcactgctggatgaagg
acttccagcaaatgtgaagtagtggaagctgaagagtaactgcattgaca
tgcagttagttaatggcctatggttttcagtatgtgagtacatagaataa
gtgtatatgtacatatataaaaacatacatttattgaatgctgctcagtc
caaatgcttaaaccagacagttagaccccatgtactgtattcctttgtca
cattgttatagaatttaaaagcttgctgatgagtagaaagtgagtgtcac
aggatatttgatcacactatgaacactgatattgtgctatttcctaacga
aaactgaaatacaaaatacatgttctagttgtggtgtggctcagcccttg
gtacacacctttcatcccaaataatgaaggtaaagtgaatttgtagaggg
aagaaccacgcttaaaagtgacatctgattgagtggcaaagtgatgaatc
agagaaagatttgacagaatactatatgctcacctatcaatagaagagag
agagagagagaaggagtacgtaagagagggaaacatcagcttgtgcctga
aaaataaagagacagatgatcacagccatccattggactgagcacagggt
ccccaatggagagctagagaaaggacataaggagctgaaggggtttgcag
ccccataggagctaacaatatgagctaagcagtacccccagagctcccag
ggatgaaaccaacaaccaaagagtacacatggtgggactcatggctccag
tagcagaggttggtcttgtgggaagtcaatgagaagagaggctccttgat
cctgtgaaggctctatgcctccagtgtaagggaaaggccaggacaggaag
ctggagtgggttggttagt

gaattcttagacagttcaataagtcagctgttatatttggaagagcaatg
gttcaataccgataaactacagaaaatgaacagcaactgatataatttgg
gagactgccaagctcaaggtcacagttccttactttctgtgtctgctgaa
gaatttgctctttgctttgttggtgaaattattaaaactggaaaacttag
gagtcagacaaaccagtggacagaaaggatctattctcttatttaaaaag
gagggaaaattcagggtaggtacaaatctcaactaatgattgattatgca
aaagattagtgagtgggcttaagatcagcaaggaagggaagagatggtga
ttcagtaaggattttgtaagcaaggccaaatgattatttagatattcaca
gtagtaataaagcagagagaagctgctcagcagttaaccattgaagactc
tgcacatcttttgttcccttaatagataggaggtaaatgaagagaagtac
ttaaggaaatgaaactgcattcccagaaacatacataggattccagtaag
aatgttcaccaacaacctagagtgtttctgtttaggagtcagaaatggtg
acagcggtattcatatccctgggtatatacacagatatgtgcttttcttc
ccccaaggaatgaaaacatggagaaaaaagggagtattaagatagtaaca
tcatgtccataaaaaagttcaacaaaatatgctagacattctgtaagaga
aaaagagagaaccatgcttggcataaagatgagaagaaaatagagctcca
aagaagaaatattcaaggatgacaatattatagaagttcaagtgcaggcc
aactgtgtaccaaaaccaacaacttttatttcactgtagaaaattacagt
gaaataggatagctcagtaatttaacgaaaaaaaaaaaaaaaagaaagta
agagactgggaatgtgatgctgaacactatcattcaatgaacatgaagag
agaaaaataaacagtcatagagagtataggtcttcagaacatgtacatga
gtataatattattggactgagtataattattatatttgaggtgattagac
ctgtagaaacaaatgcttccaaacaatgctttcatctcaataagagaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_151406531_151407691
seq2: B6Ng01-350D23.g_64_1211

seq1  GAATTCTTAGACAGTTCAATAAGTCAGCTGTTATATTTGGAAGAGCAATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTAGACAGTTCAATAAGTCAGCTGTTATATTTGGAAGAGCAATG  50

seq1  GTTCAATACCGATAAACTACAGAAAATGAACAGCAACTGATATAATTTGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCAATACCGATAAACTACAGAAAATGAACAGCAACTGATATAATTTGG  100

seq1  GAGACTGCCAAGCTCAAGGTCACAGTTCCTTACTTTCTGTGTCTGCTGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACTGCCAAGCTCAAGGTCACAGTTCCTTACTTTCTGTGTCTGCTGAA  150

seq1  GAATTTGCTCTTTGCTTTGTTGGTGAAATTATTAAAACTGGAAAACTTAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTTGCTCTTTGCTTTGTTGGTGAAATTATTAAAACTGGAAAACTTAG  200

seq1  GAGTCAGACAAACCAGTGGACAGAAAGGATCTATTCTCTTATTTAAAAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCAGACAAACCAGTGGACAGAAAGGATCTATTCTCTTATTTAAAAAG  250

seq1  GAGGGAAAATTCAGGGTAGGTACAAATCTCAACTAATGATTGATTATGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGAAAATTCAGGGTAGGTACAAATCTCAACTAATGATTGATTATGCA  300

seq1  AAAGATTAGTGAGTGGGCTTAAGATCAGCAAGGAAGGGAAGAGATGGTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGATTAGTGAGTGGGCTTAAGATCAGCAAGGAAGGGAAGAGATGGTGA  350

seq1  TTCAGTAAGGATTTTGTAAGCAAGGCCAAATGATTATTTAGATATTCACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGTAAGGATTTTGTAAGCAAGGCCAAATGATTATTTAGATATTCACA  400

seq1  GTAGTAATAAAGCAGAGAGAAGCTGCTCAGCAGTTAACCATTGAAGACTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTAATAAAGCAGAGAGAAGCTGCTCAGCAGTTAACCATTGAAGACTC  450

seq1  TGCACATCTTTTGTTCCCTTAATAGATAGGAGGTAAATGAAGAGAAGTAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACATCTTTTGTTCCCTTAATAGATAGGAGGTAAATGAAGAGAAGTAC  500

seq1  TTAAGGAAATGAAACTGCATTCCCAGAAACATACATAGGATTCCAGTAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGGAAATGAAACTGCATTCCCAGAAACATACATAGGATTCCAGTAAG  550

seq1  AATGTTCACCAACAACCTAGAGTGTTTCTGTTTAGGAGTCAGAAATGGTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTTCACCAACAACCTAGAGTGTTTCTGTTTAGGAGTCAGAAATGGTG  600

seq1  ACAGCGGTATTCATATCCCTGGGTATATACACAGATATGTGCTTTTCTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCGGTATTCATATCCCTGGGTATATACACAGATATGTGCTTTTCTTC  650

seq1  CCCCAAGGAATGAAAACATGGAGAAAAAAGGGAGTATTAAGATAGTAACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCAAGGAATGAAAACATGGAGAAAAAAGGGAGTATTAAGATAGTAACA  700

seq1  TCATGTCCATAAAAAAGTTCAACAAAATATGCTAGACATTCTGTAAGAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGTCCATAAAAAAGTTCAACAAAATATGCTAGACATTCTGTAAGAGA  750

seq1  AAAAGAGAGAACCATGCTTGGCATAAAGATGAGAAGAAAATAGAGCTCCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAGAGAACCATGCTTGGCATAAAGATGAGAAGAAAATAGAGCTCCA  800

seq1  AAGAAGAAATATTCAAGGATGACAATATTATAGAAGTTCAAGTGCAGGCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGAAATATTCAAGGATGACAATATTATAGAAGTTCAAGTGCAGGCC  850

seq1  AACTGTGTACCAAAACCAACAACTTTTATTTCACTGTAGAAAATTACAGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGTGTACCAAAACCAACAACTTTTATTTCACTGTAGAAAATTACAGT  900

seq1  GAAATAGGATAGCTCAGTAATTTAACG-AAAAAAAAAAAAAAAGAAAGTA  949
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  GAAATAGGATAGCTCAGTAATTTAACGAAAAAAAAAAAAAAAAGAAAGTA  950

seq1  AGAGACT-GGAATGTGATGCTGAACAACTATCATTCAATGAACATGAAGA  998
      ||||||| ||||||||||||||||| ||||||||||||||||||||||||
seq2  AGAGACTGGGAATGTGATGCTGAAC-ACTATCATTCAATGAACATGAAGA  999

seq1  GAG-AAAATAAACAGTCATAAGAGAGTATAGGGCCTTCCAGAACATGTAC  1047
      ||| ||||||||||||||| |||||||||||| |  | ||||||||||||
seq2  GAGAAAAATAAACAGTCAT-AGAGAGTATAGGTC--TTCAGAACATGTAC  1046

seq1  ATGAGGTAT-ATA-TATTTGACATGAGGTATA--TA-TATATTTGAGGTG  1092
      |||| |||| ||| |||| ||| ||| |||||  || |||||||||||||
seq2  ATGA-GTATAATATTATTGGAC-TGA-GTATAATTATTATATTTGAGGTG  1093

seq1  ATTAGACTGTTAGGAAACAAAATGGCTTTTCAAAATTTCAAAATGGTTTT  1142
      |||||||   || ||||| |||||    ||| |||   |||    | |||
seq2  ATTAGACCTGTA-GAAAC-AAATG---CTTCCAAA---CAA---TGCTTT  1132

seq1  CATCTCAAAATTAAGAGAA  1161
      ||||||||   ||||||||
seq2  CATCTCAA---TAAGAGAA  1148


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