CATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATT
CTTTCTTGGGGCGGGAAGTATAAACAGTCCTTCCCCATCTCCTTTGATTA
CTTTTGACTTAAAGTCTATTTTATCCTATTGCATGCTATCAGATCACCAT
GGATTAAGGTTGAACTTTAACAACACCAGTAAGAACACAATAGCCACATA
TTCATGGAAACTGAACAACTCTCTACTCAATGATTACTTAGGGAAGAAAG
AAAGCAATTGAAGATTTTCTAGAATTCAAAGAAAATGAAGATACAACATA
CCAAGATTTATGGGGTACAACGAAAGCAGTAGTAGGAGTAAAATGTTTAG
CATTGTGTGTCTTCATAAAGAAATTGGAGAGATCTTACAGTAGCATCTTA
ACAGCACACCTGAACTCTAGAACAAAAAGAAGTAAACACACCCAAGAGGA
GTAGACAGCAGGAAATAGTCAAATACAAGGCCGAAATTAATCAATTAAAA
ACAATAAGAACAATATAAAGAATCATCAAAACCAAAAGCTGGTTCTTTGA
GAATTTCAACTAGATAGACAAACCCTTAGCCATACTTAGCCACAGAAATA
GTATGCAAATTAACAAAATCAGAAATGAAAAGGGAGGCATAACAACAGAA
ACTTAGGAAATTTTTAAAACTCTTTAGATTTTACTTCAAAAGCCTATACT

CATGAAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXCAACTAGTAAGAGCCCATATCTCAAAAATTA
GGTAGAGATGCTTAAGGAAGACACCCATACATGTGTGAATACATGTGTCC
ATGGACACCCCCCCCTCACAGCACACACATGTGAAAGCACATACAAATAA
AGGGAAGAAAAGTCCAGAAGAAATAACATTTTGGTTTGGATATATACATT
TAGTTTTGAGACTCCCAAAGCCCCACTAGAGAAGAAAATAGTTTTTTTTC
TCTCTGATTATATAGATTAATGTGAATAGAAATAATAAAGTAAGACGTAG
AGAGAGAAATTTTGAAAACTAAGTAAGAAATAATCATTTTCCAAATGAAT
GCATGGGAATCTGAATGAACACTCTAGAAAACAGACTAATGCACATACGG
TGAAAGATCAGCATCAGACCCAGGAGTGATGTTATCAAAGACCTTTGGAA
TGGGGGAGGTGAGTAAAGTGTGAAACACAGGAAGAACAAAATGGGAATTG
AAATTGACTTAGAAAATTCAGATGTCTAGGACCACTGCCTGTTCTGTCTC
CAGGTGACTGTTCTGTGTTCCCTTCAGCAGTGTCCTGGAAGCGTTTCAAT
AGGTCACTGGGGAGTTCAGTTATAGACACTATGGAGCATCAAAA

Query= MSMg01no045_f21.g1 MSMg01no045_f21.g1 CHROMAT_FILE:
MSMg01no045_f21.g1 PHD_FILE: MSMg01no045_f21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:05:18 2005
         (625 letters)



>mm_chr1_126752825_126753850
          Length = 1026

 Score = 1195 bits (618), Expect = 0.0
 Identities = 624/626 (99%), Gaps = 2/626 (0%)
 Strand = Plus / Plus

                                                                       
Query: 2   aactagtaagagcccatatctcaaaaa-ttaggtagagatgcttaaggaagacacccata 60
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 201 aactagtaagagcccatatctcaaaaaattaggtagagatgcttaaggaagacacccata 260

                                                                       
Query: 61  catgtgtgaatacatgtgtccatggacacccccccc-tcacagcacacacatgtgaaagc 119
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 261 catgtgtgaatacatgtgtccatggacaccccccccctcacagcacacacatgtgaaagc 320

                                                                       
Query: 120 acatacaaataaagggaagaaaagtccagaagaaataacattttggtttggatatataca 179
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acatacaaataaagggaagaaaagtccagaagaaataacattttggtttggatatataca 380

                                                                       
Query: 180 tttagttttgagactcccaaagccccactagagaagaaaatagttttttttctctctgat 239
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tttagttttgagactcccaaagccccactagagaagaaaatagttttttttctctctgat 440

                                                                       
Query: 240 tatatagattaatgtgaatagaaataataaagtaagacgtagagagagaaattttgaaaa 299
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tatatagattaatgtgaatagaaataataaagtaagacgtagagagagaaattttgaaaa 500

                                                                       
Query: 300 ctaagtaagaaataatcattttccaaatgaatgcatgggaatctgaatgaacactctaga 359
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ctaagtaagaaataatcattttccaaatgaatgcatgggaatctgaatgaacactctaga 560

                                                                       
Query: 360 aaacagactaatgcacatacggtgaaagatcagcatcagacccaggagtgatgttatcaa 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aaacagactaatgcacatacggtgaaagatcagcatcagacccaggagtgatgttatcaa 620

                                                                       
Query: 420 agacctttggaatgggggaggtgagtaaagtgtgaaacacaggaagaacaaaatgggaat 479
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 agacctttggaatgggggaggtgagtaaagtgtgaaacacaggaagaacaaaatgggaat 680

                                                                       
Query: 480 tgaaattgacttagaaaattcagatgtctaggaccactgcctgttctgtctccaggtgac 539
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tgaaattgacttagaaaattcagatgtctaggaccactgcctgttctgtctccaggtgac 740

                                                                       
Query: 540 tgttctgtgttcccttcagcagtgtcctggaagcgtttcaataggtcactggggagttca 599
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tgttctgtgttcccttcagcagtgtcctggaagcgtttcaataggtcactggggagttca 800

                                     
Query: 600 gttatagacactatggagcatcaaaa 625
           ||||||||||||||||||||||||||
Sbjct: 801 gttatagacactatggagcatcaaaa 826


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 625
Length of database: 1026
Length adjustment: 10
Effective length of query: 615
Effective length of database: 1016
Effective search space:   624840
Effective search space used:   624840
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)