AGCTCCTATATTTCAGAAATCCGCGGAATTCAGGATTACTACGAGCCACC
ACCTTGCTCACTAAATATTATCCTTTTTTTAGAATAAAAATAATCATTAA
TAAAATTGCTAAAATAGCAGCCTGAGGATCTGATCGTGTGGTTGTTAGGT
TATCTGATAGAAGAAGGGTGGGTCCAGGTGAGCATGGAGGTGCCTTCCAG
CCGGCGCATGTCATGTTAATGGGAAGCCCTCCAAATGATTGTGTGTGCAA
GTTTCAGATTCACAAAACAGTTTATGAAGACCATCGAAAACTGCTAGGTG
TGGTGTTGCAGTCTCTTGAGTTCAAGGCCAGCCTGGTCTGCCTATTGGGT
TCCAGAGCAGCTGGGCAATTTCATGAGATCTTGTCTGANAAGACTCTCAG
AGGAGCATCCATGTACATGTTCAACACACAGAACCTCCTTTTTTGGTATT
TGTTTATTTCCAGAGATGAGCCCTGGAGACACAGCAACTACAGCACCATA
AAACTGGGAAGAAAACAAATACTTTCCAAATCTGCAGTGGACTCATGTTC
TACCCAAAGCTAATGAGCAGGCATAAGAAAACAAAGTCAAACGCATTCAC
TCTTTTCTGAAAGACTGGGAAAGCCAGGAATGGCTCCCACCTTTAGTCCC
AGCACTCTAGAGGCAGAGGCATGTGGC

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXCATGATCGTGGGCCCACTGTCGCACTT
CTCTGGCTATGAAATAAGTTTCTTGATCAGAACAATACTGTGTGGAATAC
CATGATGATGGATACGGCATTCTATAAGTCCATGGATGGTGGTTTTGGCA
GAAGAATTATGCGAAGTAAAAGCAAGTCCATAACCAGAATAAGTATCTAC
TCCAGTAAGAACAAAATGTTGTCCTTTCCACAGAGGAAATGGTCTGATGT
AGTTAACCTGCCACTAGGTTGCTGGCTGGTCACCTCAGGAAATGGTGCTA
TATCTGGGTCTCAGTCTTGGTCTCTGCTGTTAGCAGAGCTGGCATTCAGC
AGGTCAGCCTTGGTGAGCGGAAGTCTGTGTTGTTGAGTCCAAGCATAAGA
CAGTAAACCAGGTCCTAGACTTCCCTTCTTCAGTCAGCCGATCATAGGGA
ACACCTCATGAGGCTATAGGCACATGCTTGGCAGCAGATGGCATTGTAAC
AGGAGTAGAAACCTTCTACTTGCATTTGAGCAACTTCTTCATGTAACTTG
CTTGTGCCTTCCAGACCTGCTTGGGCCCGATCATATATATACCACTTTCA
TTTGATAATAGACTGCTGCTGTGCACATCCTACTTTATGGCTTGGAGG

Query= MSMg01no046_a22.b1 MSMg01no046_a22.b1 CHROMAT_FILE:
MSMg01no046_a22.b1 PHD_FILE: MSMg01no046_a22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:06:09 2005
         (547 letters)



>mm_chr1_15849292_15850238
          Length = 947

 Score =  984 bits (509), Expect = 0.0
 Identities = 538/548 (98%), Gaps = 3/548 (0%)
 Strand = Plus / Plus

                                                                       
Query: 3   ggaattca-ggattactac-gagccaccaccttgctca-ctaaatattatccttttttta 59
           |||||||| ||||||| |  |||||||||||||||||| |||||||||||||||||||||
Sbjct: 200 ggaattcaaggattacaaatgagccaccaccttgctcaactaaatattatccttttttta 259

                                                                       
Query: 60  gaataaaaataatcattaataaaattgctaaaatagcagcctgaggatctgatcgtgtgg 119
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 gaataaaaataatcattaataaaattgctaaaatagcagcctgaggatctgatcgtgtgg 319

                                                                       
Query: 120 ttgttaggttatctgatagaagaagggtgggtccaggtgagcatggaggtgccttccagc 179
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 ttgttaggttatctgatagaagaagggtgggtccaggtgagcatggaggtgccttccagc 379

                                                                       
Query: 180 cggcgcatgtcatgttaatgggaagccctccaaatgattgtgtgtgcaagtttcagattc 239
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 380 cggcgcatgtcatgttaatgggaagccctccaaatgattgtgtgcgcaagtttcagattc 439

                                                                       
Query: 240 acaaaacagtttatgaagaccatcgaaaactgctaggtgtggtgttgcagtctcttgagt 299
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 acaaaacagtttatgaagaccatcgaaaactgctaggtgtggtgttgcagtctcttgagt 499

                                                                       
Query: 300 tcaaggccagcctggtctgcctattgggttccagagcagctgggcaatttcatgagatct 359
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 tcaaggccagcctggtctgcctattgggttccagagcagctgggcaatttcatgagatct 559

                                                                       
Query: 360 tgtctganaagactctcagaggagcatccatgtacatgttcaacacacagaacctccttt 419
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 tgtctgaaaagactctcagaggagcatccatgtacatgttcaacacacagaacctccttt 619

                                                                       
Query: 420 tttggtatttgtttatttccagagatgagccctggagacacagcaactacagcaccataa 479
           ||||||||||||||| |||||||||| ||||||||||||||||||||||||||| |||||
Sbjct: 620 tttggtatttgtttacttccagagataagccctggagacacagcaactacagcagcataa 679

                                                                       
Query: 480 aactgggaagaaaacaaatactttccaaatctgcagtggactcatgttctacccaaagct 539
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 aactgggaagaaaacaaatactttccaaatctgcagtggactcatgttctacccaaagct 739

                   
Query: 540 aatgagca 547
           ||||||||
Sbjct: 740 aatgagca 747


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 547
Length of database: 947
Length adjustment: 10
Effective length of query: 537
Effective length of database: 937
Effective search space:   503169
Effective search space used:   503169
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)