Query= MSMg01no046_h21.b1 MSMg01no046_h21.b1 CHROMAT_FILE:
MSMg01no046_h21.b1 PHD_FILE: MSMg01no046_h21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:06:40 2005
(656 letters)
>mm_chr1_125607400_125608455
Length = 1056
Score = 1183 bits (612), Expect = 0.0
Identities = 642/652 (98%)
Strand = Plus / Plus
Query: 5 gaattcttcttttatattacagacactctgtggataataaaataagatatatttgtaata 64
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcttcctttatattacagacactctgtggataataaaataagatatatttgtaata 264
Query: 65 ggcattttccttgcaggctgatccacctgaggtcacaaattgtagaaattgctagataat 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ggcattttccttgcaggctgatccacctgaggtcacaaattgtagaaattgctagataat 324
Query: 125 gataagatttgacatttcaatgttcaaggacacaatattaccacatagcaacataaattc 184
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 325 gataagatttgacatttcaatgttcaaggacacaatattaccacatagcaccataaattc 384
Query: 185 caactctactcctcctagaatcttcaaccccaacacacaaacaacagaactaattcaacc 244
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 caactctactcctcccagaatcttcaaccccaacacacaaacaacagaactaattcaacc 444
Query: 245 agccattccaggtttacgttaacttccagctcatcattatgatgctctctttcttcacca 304
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 agccactccaggtttacgttaacttccagctcatcattatgatgctctctttcttcacca 504
Query: 305 tgcatatctctttacgatttatattatttaaaatgacgtgtatatgtctgctgggagggg 364
|||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 505 tgcatatctctttaagatttatattatttaaaatgacgtgtatatgtgtgctgggagggg 564
Query: 365 agggggaggcatgtgcccaggtgtgcaggtatccatcaagccagaatagggcatcaggaa 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 agggggaggcatgtgcccaggtgtgcaggtatccatcaagccagaatagggcatcaggaa 624
Query: 425 ccctggagctggaggtaaaggctgttgtaaactgaaacattgtggatgaaggaaactata 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 ccctggagctggaggtaaaggctgttgtaaactgaaacattgtggatgaaggaaactata 684
Query: 485 cttggtcctttgcaagaacagtagtaaccactgtagccacttgtaaccactgaaccatct 544
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 tttggtcctttgcaagaacagtagtaaccactgtagccacttgtaaccactgaaccatct 744
Query: 545 ctgaagtcttccctcatccacagttctattagagaaataagtaatatgccaacacataag 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 ctgaagtcttccctcatccacagttctattagagaaataagtaatatgccaacacataag 804
Query: 605 tcactctagaagatatacatagagagtacaggtaacacttatacagagactt 656
|||||||||||||| |||||||||| ||| ||||||||||||||||||||||
Sbjct: 805 tcactctagaagatgtacatagagactacgggtaacacttatacagagactt 856
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 656
Length of database: 1056
Length adjustment: 10
Effective length of query: 646
Effective length of database: 1046
Effective search space: 675716
Effective search space used: 675716
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no046_h21.g1 MSMg01no046_h21.g1 CHROMAT_FILE:
MSMg01no046_h21.g1 PHD_FILE: MSMg01no046_h21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:06:40 2005
(632 letters)
>mm_chr1_125750874_125751906
Length = 1033
Score = 1170 bits (605), Expect = 0.0
Identities = 626/633 (98%), Gaps = 1/633 (0%)
Strand = Plus / Minus
Query: 1 actcagcaaataaacaatgctattattttgcaagaaagtgacaaactgctctctataacc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 833 actcagcaaataaacaatgctattattttgcaagaaagtgacaaactgctctctataacc 774
Query: 61 cattgaatacaaaggggtattgcaaacagcattttaaactcacctctagccttccatttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 773 cattgaatacaaaggggtattgcaaacagcattttaaactcacctctagccttccatttc 714
Query: 121 taggttatgaaatgtaaaaagaaaatgaaatcatgctcatcttccagtggttaatgcatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 713 taggttatgaaatgtaaaaagaaaatgaaatcatgctcatcttccagtggttaatgcatg 654
Query: 181 atacttattttcttcttagcattttagactttgaacttagcattcaaatctcagatttgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 653 atacttattttcttcttagcattttagactttgaacttagcattcaaatctcagatttgc 594
Query: 241 ttagcattttctatgaagtaattgtgtggtacaatttttgcattcattccatttatttga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 593 ttagcattttctatgaagtaattgtgtggtacaatttttgcattcattccatttatttga 534
Query: 301 attgcctcagattagaatgatccatctctcttccctgtgaagatcctatctctcttatag 360
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 533 attgcctcagattagaatgatccatctctcttccctgtgaagatcctacctctcttatag 474
Query: 361 ttagctttttacaaaaacaaaaacaaaaatctaaatttactgttaaatagtgtgaaaatg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 ttagctttttacaaaaacaaaaacaaaaatctaaatttactgttaaatagtgtgaaaatg 414
Query: 421 agaatgggcttatgattaaacatcaaaacctgggtcttcttgaatagtgcaaaacactag 480
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 413 agaatgggcttatgattaaacatcaaaacctgggccttcttgaatagtgcaaaacactag 354
Query: 481 ttcttagttgttttggtgtactgtgtattaaagtatatcttgggatagatatgttaaatt 540
|||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||
Sbjct: 353 ttcttagttgttttggtgtactgtgtattaaagtatttcttgggatagacatgttaaatt 294
Query: 541 gattctaaaaaattccata-tgaaatcctagagtttacaaagtggaggacatatgtggta 599
||||||||||||||||||| ||||||||||||||||| ||||| ||||||||||||||||
Sbjct: 293 gattctaaaaaattccatattgaaatcctagagtttaaaaagtagaggacatatgtggta 234
Query: 600 gtgtactattcctacaatgtttatacttgggac 632
|||||||||||||||||||||||||||||||||
Sbjct: 233 gtgtactattcctacaatgtttatacttgggac 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 632
Length of database: 1033
Length adjustment: 10
Effective length of query: 622
Effective length of database: 1023
Effective search space: 636306
Effective search space used: 636306
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
