Query= MSMg01no046_n11.b1 MSMg01no046_n11.b1 CHROMAT_FILE:
MSMg01no046_n11.b1 PHD_FILE: MSMg01no046_n11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:07:05 2005
(433 letters)
>mm_chr1_89025339_89026171
Length = 833
Score = 785 bits (406), Expect = 0.0
Identities = 424/430 (98%), Gaps = 2/430 (0%)
Strand = Plus / Minus
Query: 5 gaattcttattcttacgcttgtgaccacactgccatggattttaaagttcttcctctcct 64
|||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 gaattcttattcaaaggcttgtgaccacactgccatggattttaaagttcttcctctcct 471
Query: 65 cccacagctccttgcagctccagctttgcatcctctgtcccagccaccctctctgaccca 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 cccacagctccttgcagctccagctttgcatcctctgtcccagccaccctctctgaccca 411
Query: 125 gtcgttgcaaccttcccagctgatcgctggcctggggggtggggggattagcactgctgt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 gtcgttgcaaccttcccagctgatcgctggcctggggggtggggggattagcactgctgt 351
Query: 185 gtggtgttgctcaggccttcacctcattcaggattcttgctcagctggctgtctctctcc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 gtggtgttgctcaggccttcacctcattcaggattcttgctcagctggctgtctctctcc 291
Query: 245 aactgagctccactattacccctccccatctgaactcagtgctccagacacttcaggctt 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 aactgagctccactattacccctccccatctgaactcagtgctccagacacttcaggctt 231
Query: 305 tccttctgcaaaggtcctactaagatgctaggagtgtggctcacacttaaaatcccagca 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 230 tccttctgcaaaggtcctactaagatgctaggagtgtggctcacacttaaaatcccagca 171
Query: 365 tctgggagactgct-gcaagtggactgccataaatttgaggccagcttgggctacagagt 423
|||||||||||| | |||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 170 tctgggagactg-tagcaagtggactgtcataaatttgaggccagcttgggctacagagt 112
Query: 424 cataggagga 433
||||||||||
Sbjct: 111 cataggagga 102
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 433
Length of database: 833
Length adjustment: 9
Effective length of query: 424
Effective length of database: 824
Effective search space: 349376
Effective search space used: 349376
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no046_n11.g1 MSMg01no046_n11.g1 CHROMAT_FILE:
MSMg01no046_n11.g1 PHD_FILE: MSMg01no046_n11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:07:05 2005
(452 letters)
>mm_chr1_88858773_88859624
Length = 852
Score = 843 bits (436), Expect = 0.0
Identities = 448/452 (99%)
Strand = Plus / Plus
Query: 1 tgtatcaaaattagaaaccaaaagaatgaaattgaattaataactagtgtttccctttct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgtatcaaaattagaaaccaaaagaatgaaattgaattaataactagtgtttccctttct 260
Query: 61 gttccctttactttggtattgtgacagtcacagttggagaatctctttggtgctggtggg 120
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 261 gttccctttactttggtattgtgacaatcacagttggagaatctctttggtgctggtggg 320
Query: 121 gtctggtgctaaactgtaaaggtagggggctggtggaagaagggctttgaacctccactg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtctggtgctaaactgtaaaggtagggggctggtggaagaagggctttgaacctccactg 380
Query: 181 ctcagccctgcctccagcttggcaggagcttaaggtgccggcccacaaccttggacagca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctcagccctgcctccagcttggcaggagcttaaggtgccggcccacaaccttggacagca 440
Query: 241 ggagctgtgcattctgatgcctttgaagcactgctctgacctttcttcctactcagcttt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ggagctgtgcattctgatgcctttgaagcactgctctgacctttcttcctactcagcttt 500
Query: 301 gtttcttaaagggctgtgtccaggaactttctgctggcttcactttactttgcctataaa 360
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 501 gtttcttaaagggctgtgtccaggaactttctgctggtttcactttactttgcctataaa 560
Query: 361 ggtcttataagcgagtgagctgcctttccctctgcatattctctgttctctcatttggcc 420
||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ggtcttaaaagcgagtgggctgcctttccctctgcatattctctgttctctcatttggcc 620
Query: 421 aaatcattttttcccaactctatcactccagg 452
||||||||||||||||||||||||||||||||
Sbjct: 621 aaatcattttttcccaactctatcactccagg 652
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 452
Length of database: 852
Length adjustment: 10
Effective length of query: 442
Effective length of database: 842
Effective search space: 372164
Effective search space used: 372164
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
