GCGTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCACTAA
AGCTTTGTTTCATTCCTTCTTTCTTACGTATTTGAAGAAAATATGTTATC
TTCTTTTTTCAACTTTATTAGATATTTTCTTCATTTACATTTCAAATGCT
ATCCCGAAAGTTCCCTATATCTTCCCCCTGTCCTGCTCCCCTAACCATCC
ACTCCCACTTCTTAACCCTGGGTTTCCCCTGTACTGAAGACATAAAGTTT
GCATGAACAATGGGCCCCTCCTTTCCCCTGATGGCTGAAATAAGCCACTT
CCGGCCAAAATGCCCCTCAAAAACATTAATCCCTGGGGGGGCCAAGGAAA
AAAATTCCAAACCTGTTTTTCCCCCCTATAGGGTTTTTAACAACCCTTCC
TTTTCCCTTTTGGAAATTTTTTTCTCACTCCTCTCCTTTCTGTTGGCCCC
CTTGTTTCCCCTCCCATAAAAAAAAATATCGAAAAAACACCCTTTCCTGT
TCATTTTCCCCACAAATTTTTTTTTTTTACCTCCTCCCCTTTTCCCGTGG
CGCTTTTATTTTATTAAAATACTCTTGCGCCGGATCTCTGTTCCACACAT
CTCCCTCCCCCTTTTCTCTTTTTTTTATACCCCAATATCCTCCCCTCCTC
AGAAACCCTATCTCTCCTATTCCCCCTCCCCCCCCTTCTCTTCCTTTTTC
ATTTTTCTCTCCCCCTTCCACATTCTTTCTTG

ACGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXACATATTCCTCTTGAAGTGATATTAT
CTGGGATTCTGTAGATCCAAAGTTTCCTTTTAAAGCATCATGTGCCCACA
GAGGTTCAGTTAATATGTTTTTATTTTCAGTTGAATCTTGGAACTTTAGA
ATTTCCTTTGTAATTAATAACTTCAATAACCCACTGGTCAATTTACAGTG
TACTATTCAATATCCATAGGTTCTGTAATTACTTTAGTTTTTGTTATTGA
TTTTAATTTTTGTTCTTAATATCTAATTTTACTTTACTGAGATATGATGA
AATATATATCCAATTGTGGAACATTTATGTACCTAATTCCTGACCTAAAA
ATAGATTTAGCTTAGTCAAAGATTTAGGGCTTCTGAAAATTTTTATTCTA
AATCTCTTATTTAGATTAGTCTTTTGATTCAAGTGTATTTGATCCTTTGT
GTAGGTAAACATGACGCTTAGTTAGTTAGTTAGTTAGTTAGTTAGTTAGT
TAGTTAGTTAGTTATTTTTTAGTCTGCCTGCTGTCCAATTCTATGACTGT
AGTCCTTTGTCCACTTGCCTCAAATTGTCTCCTATCTTTTCCCCCCATCC
TACATCACTTTTTTTTCCTACTTCCTAACTCCAACACTGCTCCTTGTATT
TCCTCCACC

Query= MSMg01no047_n08.g1 MSMg01no047_n08.g1 CHROMAT_FILE:
MSMg01no047_n08.g1 PHD_FILE: MSMg01no047_n08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:08:14 2005
         (490 letters)



>mm_chr1_26522250_26523139
          Length = 890

 Score =  870 bits (450), Expect = 0.0
 Identities = 468/474 (98%)
 Strand = Plus / Minus

                                                                       
Query: 1   acatattcctcttgaagtgatattatctgggattctgtagatccaaagtttccttttaaa 60
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 879 acatattcctcttgaagtgatattatctgggattctgtagatccaaagtttccttttaga 820

                                                                       
Query: 61  gcatcatgtgcccacagaggttcagttaatatgtttttattttcagttgaatcttggaac 120
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 819 gcatcatatgcccacagaggttcagttaatatgtttttattttcagttgaatcttggaac 760

                                                                       
Query: 121 tttagaatttcctttgtaattaataacttcaataacccactggtcaatttacagtgtact 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 759 tttagaatttcctttgtaattaataacttcaataacccactggtcaatttacagtgtact 700

                                                                       
Query: 181 attcaatatccataggttctgtaattactttagtttttgttattgattttaatttttgtt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 699 attcaatatccataggttctgtaattactttagtttttgttattgattttaatttttgtt 640

                                                                       
Query: 241 cttaatatctaattttactttactgagatatgatgaaatatatatccaattgtggaacat 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 639 cttaatatctaattttactttactgagatatgatgaaatatatatccaattgtggaacat 580

                                                                       
Query: 301 ttatgtacctaattcctgacctaaaaatagatttagcttagtcaaagatttagggcttct 360
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 579 ttatgtacctcattcctgacctaaaaatagatttagcttagtcaaagatttagggcttct 520

                                                                       
Query: 361 gaaaatttttattctaaatctcttatttagattagtcttttgattcaagtgtatttgatc 420
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 gaaaaattttattctaaatctcttatttagattagtcttttgattcaagtgtatttgatc 460

                                                                 
Query: 421 ctttgtgtaggtaaacatgacgcttagttagttagttagttagttagttagtta 474
           ||||||||||||||||||||||||||||||||||||||||| |||| |||||||
Sbjct: 459 ctttgtgtaggtaaacatgacgcttagttagttagttagtttgttaattagtta 406


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 490
Length of database: 890
Length adjustment: 10
Effective length of query: 480
Effective length of database: 880
Effective search space:   422400
Effective search space used:   422400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)