Query= MSMg01no048_k19.b1 MSMg01no048_k19.b1 CHROMAT_FILE:
MSMg01no048_k19.b1 PHD_FILE: MSMg01no048_k19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:09:52 2005
(687 letters)
>mm_chr1_136606758_136607844
Length = 1087
Score = 1290 bits (667), Expect = 0.0
Identities = 682/687 (99%)
Strand = Plus / Plus
Query: 1 agagagccctgtgcacacttggaagggcaacaccgtgagactcagaacctgcaccctcag 60
|||||||||||||||||||||||||||||||| ||||||||||||||||| | ||||||
Sbjct: 201 agagagccctgtgcacacttggaagggcaacagtgtgagactcagaacctggaacctcag 260
Query: 61 ggggcatcagaaggcattctgcccctttggctgaccttgagtaactcatttactctccta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggggcatcagaaggcattctgcccctttggctgaccttgagtaactcatttactctccta 320
Query: 121 ggccttagtctccagacgtggaaatgggggtttggcacatcgaggatctgagtctttccc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggccttagtctccagacgtggaaatgggggtttggcacatcgaggatctgagtctttccc 380
Query: 181 atcctgatacctcctgtcccaactgaaggggaaacggtacagaaggctagcccctgagta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atcctgatacctcctgtcccaactgaaggggaaacggtacagaaggctagcccctgagta 440
Query: 241 tgtagttccttatttagccttccaagtggactgaggcctacagtctattacctccatcac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgtagttccttatttagccttccaagtggactgaggcctacagtctattacctccatcac 500
Query: 301 tgttccttacagagtctccaggcctgactggccactgttagcccagaactgcccaccctc 360
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 501 tgttccttacagagtctccaggcctgacaggccactgttagcccagaactgcccaccctc 560
Query: 361 tgcacaggacataattttcactggggaagagggtccctgggatagacaggagactcagag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tgcacaggacataattttcactggggaagagggtccctgggatagacaggagactcagag 620
Query: 421 gcctcccaaggtcatgctgtcttctctgctgtccgctacctcaagaatccttccttggta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gcctcccaaggtcatgctgtcttctctgctgtccgctacctcaagaatccttccttggta 680
Query: 481 gaaagctctctagtgggagctataccagcccattgcacagcctggactgcctgcatggaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gaaagctctctagtgggagctataccagcccattgcacagcctggactgcctgcatggaa 740
Query: 541 gaccgaggtgttcttggggagaacctgttgggacttcagctgagataagtccctagcctg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 gaccgaggtgttcttggggagaacctgttgggacttcagctgagataagtccctagcctg 800
Query: 601 gcgctgggtctcgggtactttaggaagactcctgggaaaagaggagaaagttaggctgag 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 gcgctgggtctcgggtactttaggaagactcctgggaaaagaggagaaagttaggctgag 860
Query: 661 tcccaggcttcaattcccatttgcacg 687
|||||||||||||||||||||||||||
Sbjct: 861 tcccaggcttcaattcccatttgcacg 887
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 687
Length of database: 1087
Length adjustment: 10
Effective length of query: 677
Effective length of database: 1077
Effective search space: 729129
Effective search space used: 729129
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no048_k19.g1 MSMg01no048_k19.g1 CHROMAT_FILE:
MSMg01no048_k19.g1 PHD_FILE: MSMg01no048_k19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:09:53 2005
(279 letters)
>mm_chr1_136793532_136794210
Length = 679
Score = 484 bits (250), Expect = e-141
Identities = 271/282 (96%), Gaps = 8/282 (2%)
Strand = Plus / Minus
Query: 1 agaccaggctggcctcgaactcagaaatccgcctgcctctgcctccccccc----gctgg 56
|||||||||||||||||||||||||||||||||||||||||||| ||| |||||
Sbjct: 565 agaccaggctggcctcgaactcagaaatccgcctgcctctgcct----cccaagtgctgg 510
Query: 57 gattaaaggtgtgcgccaccactgcccagctatttattcatttatttatttttgggagcc 116
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 gattaaaggtgtgcgccaccactgcccagctatttattcatttatttatttttgggagcc 450
Query: 117 tcagtttcttaaagggtagagtacttagctgtatttatgttgtcatcatcataactttgt 176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 tcagtttcttaaagggtagagtacttagctgtatttatgttgtcatcatcataactttgt 390
Query: 177 ttaagattgatctgtttgcatatgtgtgcaagagtggcgaggagggaggaaggcacaatt 236
||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||
Sbjct: 389 ttaagattgatctgtttgcatatgtgtgcaagagtggggaggagggaggaaggcagaatt 330
Query: 237 agagtagagagagaagcagtttgacaactaaaagatgctggt 278
|||||||||||||||||||||||| |||||||||||||||||
Sbjct: 329 agagtagagagagaagcagtttgaaaactaaaagatgctggt 288
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 279
Length of database: 679
Length adjustment: 9
Effective length of query: 270
Effective length of database: 670
Effective search space: 180900
Effective search space used: 180900
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
