Query= MSMg01no051_l17.b1 MSMg01no051_l17.b1 CHROMAT_FILE:
MSMg01no051_l17.b1 PHD_FILE: MSMg01no051_l17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:51:49 2005
(109 letters)
>mm_chr1_109928103_109928611
Length = 509
Score = 203 bits (105), Expect = 2e-57
Identities = 108/109 (99%)
Strand = Plus / Plus
Query: 1 taatcaatgtgagcattttcagtctatagtcatttggcttttttgttactggaatatgta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 taatcaatgtgagcattttcagtctatagtcatttggcttttttgttactggaatatgta 260
Query: 61 aggtacaataggaaaatgtaacatagaaagatgtttagctcttggtagt 109
||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aggcacaataggaaaatgtaacatagaaagatgtttagctcttggtagt 309
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 109
Length of database: 509
Length adjustment: 8
Effective length of query: 101
Effective length of database: 501
Effective search space: 50601
Effective search space used: 50601
X1: 6 (11.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 6 (12.4 bits)
S2: 6 (12.3 bits)
| Query= MSMg01no051_l17.g1 MSMg01no051_l17.g1 CHROMAT_FILE:
MSMg01no051_l17.g1 PHD_FILE: MSMg01no051_l17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:51:50 2005
(245 letters)
>mm_chr1_110054781_110055424
Length = 644
Score = 427 bits (221), Expect = e-124
Identities = 239/249 (95%), Gaps = 9/249 (3%)
Strand = Plus / Minus
Query: 1 atttcaaacatggtttcagttttttaaaaatattctcaaaataatattttca----cccc 56
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 atttcaaacatggtttcagttttttaaaaatattctcaaaataatattttcaaatt---- 389
Query: 57 attaagagaaaccaaggctactttcaaatattatttgaaaatattaatttgaattaccca 116
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 attaagagaaaccaaggctactttcaaatattatttgaaaatattaatttgaattaccca 329
Query: 117 gtgaggctctgttgtggaatataaggaaaaaattacaagttaaacaaaaagaggcgaaat 176
|||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||
Sbjct: 328 gtgaggctctgttgtggaatataaggaaaaaattacaagttaaa-aaaaagaggcaaaat 270
Query: 177 taatagattcttaactatgaaatcaatttccaacaatgctgcttattttgattttcttaa 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 taatagattcttaactatgaaatcaatttccaacaatgctgcttattttgattttcttaa 210
Query: 237 tttgatttg 245
|||||||||
Sbjct: 209 tttgatttg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 245
Length of database: 644
Length adjustment: 9
Effective length of query: 236
Effective length of database: 635
Effective search space: 149860
Effective search space used: 149860
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
