Query= MSMg01no052_d16.b1 MSMg01no052_d16.b1 CHROMAT_FILE:
MSMg01no052_d16.b1 PHD_FILE: MSMg01no052_d16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:52:47 2005
(290 letters)
>mm_chr1_196090894_196091583
Length = 690
Score = 514 bits (266), Expect = e-150
Identities = 284/290 (97%)
Strand = Plus / Plus
Query: 1 caggtgacaggaattggtttgggaggaaggtttctgattcagaatcctgaagaaacagga 60
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 201 caggtgacaggaattggtttgggaggaaggtttctgattcagaaccctgaagaaacagga 260
Query: 61 gtggtttgcccaaataatagaagtctaccaactaccttccaaaatacttggcagagctga 120
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtggttttcccaaataatagaagtctaccaactaccttccaaaatacttggcagagctga 320
Query: 121 gccagtgcatggctcatgcttgaggctactgttggtttagttgtgggtttacttcggtat 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gccagtgcatggctcatgcttgaggctactgttggtttagttgtgggtttacttcggtac 380
Query: 181 ttaaaacaagcataacatgaattacttggtgttcgggtatgttctatataaaacaaaaac 240
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 381 ttaaaacaagcataacatgaattacttggtgtttgggtatgttctatataaaacaaaaac 440
Query: 241 aaaatattatcataaaacagtactggctcacaaacccagaatgttataaa 290
|||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaaatacgatcataaaacagtactggctcacaaacccagaatgttataaa 490
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 290
Length of database: 690
Length adjustment: 9
Effective length of query: 281
Effective length of database: 681
Effective search space: 191361
Effective search space used: 191361
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no052_d16.g1 MSMg01no052_d16.g1 CHROMAT_FILE:
MSMg01no052_d16.g1 PHD_FILE: MSMg01no052_d16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:52:47 2005
(290 letters)
>mm_chr1_196237294_196237983
Length = 690
Score = 532 bits (275), Expect = e-155
Identities = 287/291 (98%), Gaps = 1/291 (0%)
Strand = Plus / Minus
Query: 1 acacccctatctgtcatctttggcaagctgctggtgactgcaccattgtagtttcataac 60
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 654 acacccctatctgtcatctttggcaagctgctggtgactgcagcattgtagtttcataac 595
Query: 61 tgagtaaatgaacacataatagtcacatctccagtgctttgtgaggacaaatgagaggat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 594 tgagtaaatgaacacataatagtcacatctccagtgctttgtgaggacaaatgagaggat 535
Query: 121 g-gtatcaagtgctcaacacaatgtgtgtcacttagtaaacattgtctgtgcattaggga 179
| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 534 gcgtatcaagtgctcaacacaatgtgtgtcacttaataaacattgtctgtgcattaggga 475
Query: 180 ttctgttacaaacagcactgctgagccctcctgagctgtgataggacaatggctctggtt 239
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 474 ttctgttacaaacagcactgctgagccctcctgagctgtgataggacaatagctctggtt 415
Query: 240 ctgatttctctactagcttgtcacctcaacttaaactcataactttttaag 290
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 414 ctgatttctctactagcttgtcacctcaacttaaactcataactttttaag 364
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 290
Length of database: 690
Length adjustment: 9
Effective length of query: 281
Effective length of database: 681
Effective search space: 191361
Effective search space used: 191361
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|