Query= MSMg01no052_p13.b1 MSMg01no052_p13.b1 CHROMAT_FILE:
MSMg01no052_p13.b1 PHD_FILE: MSMg01no052_p13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:53:44 2005
(578 letters)
>mm_chr1_168984092_168985067
Length = 976
Score = 940 bits (486), Expect = 0.0
Identities = 511/520 (98%), Gaps = 2/520 (0%)
Strand = Plus / Minus
Query: 3 gaattctctgatgatgccttcaggtgaaaaccctgcagtacccgagagaaacctgggagc 62
|||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 518 gaattctctgatgagggtttcaggtgaaaaccctgcagtacccgagagaaacctgggagc 459
Query: 63 tcgagagggcacgtgccctcagactgtgctttcaagtgtgctctggccttggctgagaca 122
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 tcgagagggcatgtgccctcagactgtgctttcaagtgtgctctggccttggctgagaca 399
Query: 123 gatttctgaaaggacctccatgaagctgtggctgctggccgctgctgatagcaaagacag 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 gatttctgaaaggacctccatgaagctgtggctgctggccgctgctgatagcaaagacag 339
Query: 183 catacactagcttcccacacccaccactcccttctccactattcaaggagtgcctgcagt 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 catacactagcttcccacacccaccactcccttctccactattcaaggagtgcctgcagt 279
Query: 243 aagtgggtgttgcctaaactcctgttctcagagtgcacagggttatgcctgccaggccct 302
|||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||
Sbjct: 278 aagtgggtgttgcctaaactcctgttctcagagtgcacaggg--atgactgccaggccct 221
Query: 303 ggaccacccaggattctgtgagcatttcctacatgcctgttgtgtgctgagcactcgata 362
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 220 ggaccacccaggattctgtgagcatttcctacatgcctgtcgtgtgctgagcactcgata 161
Query: 363 taacaatcacctcatttcaccttatcaatgcttgtcagaggtatgtgtccaggtcacagg 422
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 160 taacaatcacctcatttcaccttatcaacgcttgtcagaggtatgtgtccaggtcacagg 101
Query: 423 cgttttacagatgtagaaactgaggcctgcgaggattatgtaaaattacataatcatatc 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 100 cgttttacagatgtagaaactgaggcctgcgaggattatgtaaaattacataatcatatc 41
Query: 483 aacccagagtcatatcagtaactgctacagctgggatcta 522
||||||||||||||||||||||||||||||||||||||||
Sbjct: 40 aacccagagtcatatcagtaactgctacagctgggatcta 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 578
Length of database: 976
Length adjustment: 10
Effective length of query: 568
Effective length of database: 966
Effective search space: 548688
Effective search space used: 548688
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no052_p13.g1 MSMg01no052_p13.g1 CHROMAT_FILE:
MSMg01no052_p13.g1 PHD_FILE: MSMg01no052_p13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:53:45 2005
(477 letters)
>mm_chr1_168869702_168870574
Length = 873
Score = 445 bits (230), Expect = e-129
Identities = 242/248 (97%), Gaps = 4/248 (1%)
Strand = Plus / Plus
Query: 1 catgccctagccattgtctagaatgaatttctataaattattatgaataaacaaattaat 60
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 201 catgccctagccattgtctagaatgaatttctataaattattatgaataaccaaattaat 260
Query: 61 tacatgactatgtttataatgtgattccatcctatgtataagtgacaaaatgtgtttcat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tacatgactatgtttataatgtgattccatcctatgtataagtgacaaaatgtgtttcat 320
Query: 121 aaatgtgtgtgtgtgtgtttgcatgtgtgtacaccacaaatgttgtataagatgacttaa 180
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaatgtgtgtgtgt----ttgcatgtgtgtacaccacaaatgttgtataagatgacttaa 376
Query: 181 gcatacgaaggtatgtggaaagatgccccagaaatgggtgggtcatagcagttgggaaag 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 377 gcatacgaaggtatgtggaaagatgccccagaaatgggtgggtcatagcagttgtgaaag 436
Query: 241 aaaattat 248
||||||||
Sbjct: 437 aaaattat 444
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 477
Length of database: 873
Length adjustment: 10
Effective length of query: 467
Effective length of database: 863
Effective search space: 403021
Effective search space used: 403021
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
