Query= MSMg01no055_p10.b1 MSMg01no055_p10.b1 CHROMAT_FILE:
MSMg01no055_p10.b1 PHD_FILE: MSMg01no055_p10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:57:30 2005
(317 letters)
>mm_chr1_21895681_21896398
Length = 718
Score = 588 bits (304), Expect = e-172
Identities = 313/316 (99%), Gaps = 2/316 (0%)
Strand = Plus / Minus
Query: 4 ggaattccatcttac-catatccatgagttttggtgggtgagcacacacaaccaaccgtg 62
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 ggaattccatcttacaaatatccatgagttttggtgggtgagcacacacaaccaaccgtg 283
Query: 63 gttgtcatcaagtttgccaaagctgattatttttcagcaatgctgttgaacacttgaggt 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 gttgtcatcaagtttgccaaagctgattatttttcagcaatgctgttgaacacttgaggt 223
Query: 123 cgaggtttctgtatcattcagccgaaactatcctcaattttgcagtccctttgcctcagc 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 222 cgaggtttctgtatcattcagccgaaactatcctcaattttgcagtccctttgcctcagc 163
Query: 183 ttccctaacagcctggacataggcatgtgccaccacacccaaatgaagtttctggataac 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 162 ttccctaacagcctggacataggcatgtgccaccacacccaaatgaagtttctggataac 103
Query: 243 ttagccatagacagaacatggtgatgtaaatcaatataaaagggtttcagggaacattta 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 102 ttagccatagacagaacatggtgatgtaaatcaatataaaagggtttcagggaacattta 43
Query: 303 gg-ttttttttcacaa 317
|| |||||||||||||
Sbjct: 42 ggtttttttttcacaa 27
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 317
Length of database: 718
Length adjustment: 9
Effective length of query: 308
Effective length of database: 709
Effective search space: 218372
Effective search space used: 218372
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no055_p10.g1 MSMg01no055_p10.g1 CHROMAT_FILE:
MSMg01no055_p10.g1 PHD_FILE: MSMg01no055_p10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:57:30 2005
(249 letters)
>mm_chr1_21772129_21772774
Length = 646
Score = 439 bits (227), Expect = e-128
Identities = 241/247 (97%), Gaps = 3/247 (1%)
Strand = Plus / Plus
Query: 1 cacttgaaaagaccctgtgtgcaaattgatgtgaaattatgaacagcacactaaattggt 60
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cacttgaaaaaaccctgtgtgcaaattgatgtgaaattatgaacagcacactaaattggt 260
Query: 61 tcctacttaaaaactccaattaagggttctattctgtcaaatttccttccacctaaaact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcctacttaaaaactccaattaagggttctattctgtcaaatttccttccacctaaaact 320
Query: 121 caaaagtaagaacattcttgaaaagaacacacacagaaacaaatgagaaaaagttcctct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 caaaagtaagaacattcttgaaaagaacacacacagaaacaaatgagaaaaagttcctct 380
Query: 181 tcttatagtcatcatgatttgtactgctgagggtcctttccaccttgttaattaatgaca 240
| ||||||||| |||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 381 t---atagtcatcgtgatttttactgctgagggtcctttccaccttgttaattaatgaca 437
Query: 241 agacaaa 247
|||||||
Sbjct: 438 agacaaa 444
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 249
Length of database: 646
Length adjustment: 9
Effective length of query: 240
Effective length of database: 637
Effective search space: 152880
Effective search space used: 152880
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
