Query= MSMg01no056_b14.b1 MSMg01no056_b14.b1 CHROMAT_FILE:
MSMg01no056_b14.b1 PHD_FILE: MSMg01no056_b14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:57:40 2005
(291 letters)
>mm_chr1_72868494_72869184
Length = 691
Score = 551 bits (285), Expect = e-161
Identities = 288/289 (99%)
Strand = Plus / Minus
Query: 1 atcagtaataagtatgaaaattataaaggcaagagtatccatgcacatcccgagatgacc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 609 atcagtaataagtatgaaaattataaaggcaagagtatccatgcacatcccgagatgacc 550
Query: 61 ttggactcacaatcctcctgcctcggtgtttagagtgctgagatcacaggcatgaaccac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 ttggactcacaatcctcctgcctcggtgtttagagtgctgagatcacaggcatgaaccac 490
Query: 121 tgggaatttctagaatttctctttctggtgagtcgaatcagtgctgatccctttcccctt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 tgggaatttctagaatttctctttctggtgagtcgaatcagtgctgatccctttcccctt 430
Query: 181 atccccagttaatagccagctttaccctgcacaaccccagatacccacaccccaagagga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 atccccagttaatagccagctttaccctgcacaaccccagatacccacaccccaagagga 370
Query: 241 accttatctcagtccttccctaaccaaacagcctccaagtcctactcaa 289
|||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 369 accttatctcagtccttccctaaccaaacaacctccaagtcctactcaa 321
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 291
Length of database: 691
Length adjustment: 9
Effective length of query: 282
Effective length of database: 682
Effective search space: 192324
Effective search space used: 192324
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no056_b14.g1 MSMg01no056_b14.g1 CHROMAT_FILE:
MSMg01no056_b14.g1 PHD_FILE: MSMg01no056_b14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:57:40 2005
(249 letters)
>mm_chr1_72765047_72765693
Length = 647
Score = 451 bits (233), Expect = e-131
Identities = 243/247 (98%), Gaps = 2/247 (0%)
Strand = Plus / Plus
Query: 1 tttcccccttttatagatgacaaaacctctaagattttctacttgaagagagagtcattg 60
||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||
Sbjct: 201 tttcccccttttatagatgacaaaaactctaagattttctacttgaagagag--tcattg 258
Query: 61 aatggggaaagaatgaactccacaaggagttccgtgcttcaacttcacctccccgttcac 120
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 aatggggaaagaatgaagtccacaaggagttccgtgcttcaacttcacctccccgttcac 318
Query: 121 tggcttgggcaacagaagagctttgttctctatagataaagaaaccaaggtacagagtgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 tggcttgggcaacagaagagctttgttctctatagataaagaaaccaaggtacagagtgg 378
Query: 181 tatctgtgaggggttttgatggttggaggccagtctcagcaagtgataagtatataacgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 tatctgtgaggggttttgatggttggaggccagtctcagcaagtgataagtatataacgc 438
Query: 241 taaaagg 247
|||||||
Sbjct: 439 taaaagg 445
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 249
Length of database: 647
Length adjustment: 9
Effective length of query: 240
Effective length of database: 638
Effective search space: 153120
Effective search space used: 153120
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
