Query= MSMg01no056_h21.b1 MSMg01no056_h21.b1 CHROMAT_FILE:
MSMg01no056_h21.b1 PHD_FILE: MSMg01no056_h21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:58:10 2005
(286 letters)
>mm_chr1_72868499_72869184
Length = 686
Score = 503 bits (260), Expect = e-147
Identities = 278/284 (97%)
Strand = Plus / Minus
Query: 1 agtaataagtatgaaaattataaaggcaagagtatccatgctcttccccagatgaccttg 60
||||||||||||||||||||||||||||||||||||||||| | |||| |||||||||||
Sbjct: 601 agtaataagtatgaaaattataaaggcaagagtatccatgcacatcccgagatgaccttg 542
Query: 61 gactcacaatcctcctgcctcggtgtttagagtgctgagatcacaggcatgaaccactgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gactcacaatcctcctgcctcggtgtttagagtgctgagatcacaggcatgaaccactgg 482
Query: 121 gaatttctagaatttctctttctggtgagtcgaatcagtgctgatccctttccccttatc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gaatttctagaatttctctttctggtgagtcgaatcagtgctgatccctttccccttatc 422
Query: 181 cccagttaatagccagctttaccctgcacaaccccagatacccacaccccaagaggaacc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 cccagttaatagccagctttaccctgcacaaccccagatacccacaccccaagaggaacc 362
Query: 241 ttatctctttccttccctaaccaaacagcctccaagtcctactc 284
||||||| |||||||||||||||||| ||||||||||||||||
Sbjct: 361 ttatctcagtccttccctaaccaaacaacctccaagtcctactc 318
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 286
Length of database: 686
Length adjustment: 9
Effective length of query: 277
Effective length of database: 677
Effective search space: 187529
Effective search space used: 187529
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no056_h21.g1 MSMg01no056_h21.g1 CHROMAT_FILE:
MSMg01no056_h21.g1 PHD_FILE: MSMg01no056_h21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:58:10 2005
(292 letters)
>mm_chr1_72765046_72765735
Length = 690
Score = 503 bits (260), Expect = e-147
Identities = 276/282 (97%), Gaps = 2/282 (0%)
Strand = Plus / Plus
Query: 1 ctttcccccttttatagatgacaaaacctctaagattttctacttgaagacacagtcatt 60
|||||||||||||||||||||||||| |||||||||||||||||||||| | |||||||
Sbjct: 201 ctttcccccttttatagatgacaaaaactctaagattttctacttgaag--agagtcatt 258
Query: 61 gaatggggaaagaatgaactccacaaggagttccgtgcttcaacttcacctccccgttca 120
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 gaatggggaaagaatgaagtccacaaggagttccgtgcttcaacttcacctccccgttca 318
Query: 121 ctggcttgggcaacagaagagctttgttctctatagataaagaaaccaaggtacagagtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 ctggcttgggcaacagaagagctttgttctctatagataaagaaaccaaggtacagagtg 378
Query: 181 gtatctgtgaggggttttgatggttggaggccagtctcagcaagtgataagtatataacg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 gtatctgtgaggggttttgatggttggaggccagtctcagcaagtgataagtatataacg 438
Query: 241 ctaaaaggccattacagacaggctggagagaaagtgccacta 282
||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 439 ctaaaaggccactacagacaggctggagagaaagtgccacta 480
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 292
Length of database: 690
Length adjustment: 9
Effective length of query: 283
Effective length of database: 681
Effective search space: 192723
Effective search space used: 192723
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|