Query= MSMg01no056_i18.b1 MSMg01no056_i18.b1 CHROMAT_FILE:
MSMg01no056_i18.b1 PHD_FILE: MSMg01no056_i18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:58:14 2005
(169 letters)
>mm_chr1_180470238_180470807
Length = 570
Score = 313 bits (162), Expect = 3e-90
Identities = 168/170 (98%), Gaps = 1/170 (0%)
Strand = Plus / Plus
Query: 1 atctttctcagacagttttctttgcagttttactttgctgattctgtcgcattgattcca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atctttctcagacagttttctttgcagttttactttgctgattctgtcgcattgattcca 260
Query: 61 gccagaccc-tgtgaaggcggctggaaatagagacgacaccctcctccacttggccacat 119
||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gccagacccttctgaaggcggctggaaatagagacgacaccctcctccacttggccacat 320
Query: 120 ttcccacactggtagcagctgttagtcagagtggacaaagaaggcagggc 169
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttcccacactggtagcagctgttagtcagagtggacaaagaaggcagggc 370
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 169
Length of database: 570
Length adjustment: 8
Effective length of query: 161
Effective length of database: 562
Effective search space: 90482
Effective search space used: 90482
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no056_i18.g1 MSMg01no056_i18.g1 CHROMAT_FILE:
MSMg01no056_i18.g1 PHD_FILE: MSMg01no056_i18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:58:14 2005
(286 letters)
>mm_chr1_180582980_180583667
Length = 688
Score = 468 bits (242), Expect = e-136
Identities = 276/290 (95%), Gaps = 6/290 (2%)
Strand = Plus / Minus
Query: 1 cagacatgaaagggacgataaggcagctgggcaggaaggcaaggacacctcgctgtttct 60
|||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 488 cagacatgaaagggacaataaggcagccgggcaggaaggcaaggacacctcgctgtttct 429
Query: 61 gggcccagctgtgattagccattccctac----ttttttaaaaaaggtaattgaaatcct 116
|||||||||||||||||||| |||||||| |||||| |||||||||||||||||||
Sbjct: 428 gggcccagctgtgattagccgttccctactttttttttt--aaaaggtaattgaaatcct 371
Query: 117 aggaacactctggaagttcagattagctccaaccctttcgccatacgaccccagcttcat 176
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 370 aggaacactctggaagttcagattagctccaaccctttcgccatacaaccccagcttcat 311
Query: 177 cacccaggaatgtggtccagtggctcagttagcatctttgagccttcctcatctacacaa 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 cacccaggaatgtggtccagtggctcagttagcatctttgagccttcctcatctacacaa 251
Query: 237 atgggatgtttttaacatcatctttgcagtgtgacttggcaaagccagac 286
|||||||| | |||||||||||||||||||||||||||||||||||||
Sbjct: 250 atgggatggtggcaacatcatctttgcagtgtgacttggcaaagccagac 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 286
Length of database: 688
Length adjustment: 9
Effective length of query: 277
Effective length of database: 679
Effective search space: 188083
Effective search space used: 188083
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
