ATCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCCATTGAATTACCTTCCCCAAACTCACATATATAAATTTCACCCTC
CATGTGATATTTAAAATTAGGGCCACTAGTGACCTGATTGACTCAATTCC
AGAGAGCTATCACTATATGTCTGCTATGTGAGCAGACATCTATGAAGAAT
AAAGTAGGCCATCAACAGACAGACTCAGTCAACACTGTCATTTAAGACTT
TCCTGCCTCTGGAACTTTCTATTATTTACAAGCCATCTAGCTTACATTAC
TTAAAGACTAAGGTCACACATTATGAAAATCTGTAGCCACATAACAAGCC
AAGTATGGTGGCTCATGATGGGAGAAGAGAAAAGAGAGGTTTTTGTCTTG
CTGGTCAACATCAGGTTGAATAACACTGTCTTACAAGTAAACAAGTGGAA
AGCAATGGGGGAAGACAACTTGACATCAACCTCTGGCCTCATCCCATGTA
TACATGGTAAGTACACCTACACTCACAAATGCACCCAGACATGAACATGC
ACCACCCTGTGCACCACACAGAAATAACAGACAGAAAAATGTAAAACAAT
AAGTTAACAGAGGAACTTCATTAATCCTAAAGAAAGGCAGGGATCCGTGT
AATATAAAACAAACATATATAAAATCAAAAAGACCAATCGTTGAGTCTTT
GAAAAAGTACATTTTCACAT

ACGATATAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXAGAAGACCCCGGGAATCTCTGCTGA
ACATTTGCACGGAATTCTATAACCACTGCGGGCCGAGGCTGAAGATCCTG
CAAAACCTAGCTGGGGAGCCACGGGTCACTGCCCTGGAGCTGCTGGATGT
GAAGTCTCACATGAGGTACCCACGCAAGTGCCTCACCTCTGCCTGGGATG
CTAAGAGCTTAAGCCATGTGTCTGTGTCTGTGTGCTGGGATGAACCAGGA
AGTGGGGGATGCTCTGGGAGTGGGAAGGCTTCCTCCAGGAAAAGGAAGGA
GATTCTTAGAATAATTTGTTTCCTGTGACTTGGGTACATACCATTTAGAT
CCTTCTGGTAAAGTACACATTTTATCTATTAAAGAGATCTCAGAAATAGA
AAATGTTTTAAAAATGGGAATTCAGTCTGTAACTTACTGTCTGGCAGATT
TTTAAATGTGATCCCAGAGGACCTAGTAGCTGATTTCTAGCAGTTTTTAA
AGGATCATAAGAATTCCTTCAAAGAAAAAGTTCATGGTTAACAAAAGACT
TACTTTGAATGCTTAATCTATCTACAAAACTAAATGTTCAGTTCTCACCA
ACCTCTCCAGAAACTGAATTATAATTTGCCAAAACACATCAATTTCCTTG
AACAGAAATGCCTTTTTTTT

Query= MSMg01no056_p18.b1 MSMg01no056_p18.b1 CHROMAT_FILE:
MSMg01no056_p18.b1 PHD_FILE: MSMg01no056_p18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:58:47 2005
         (603 letters)



>mm_chr1_66786631_66787633
          Length = 1003

 Score = 1145 bits (592), Expect = 0.0
 Identities = 598/600 (99%)
 Strand = Plus / Minus

                                                                       
Query: 4   ggaattccattgaattaccttccccaaactcacatatataaatttcaccctccatgtgat 63
           |||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||
Sbjct: 775 ggaattccattgaattaatttccccaaactcacatatataaatttcaccctccatgtgat 716

                                                                       
Query: 64  atttaaaattagggccactagtgacctgattgactcaattccagagagctatcactatat 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 715 atttaaaattagggccactagtgacctgattgactcaattccagagagctatcactatat 656

                                                                       
Query: 124 gtctgctatgtgagcagacatctatgaagaataaagtaggccatcaacagacagactcag 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 655 gtctgctatgtgagcagacatctatgaagaataaagtaggccatcaacagacagactcag 596

                                                                       
Query: 184 tcaacactgtcatttaagactttcctgcctctggaactttctattatttacaagccatct 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 595 tcaacactgtcatttaagactttcctgcctctggaactttctattatttacaagccatct 536

                                                                       
Query: 244 agcttacattacttaaagactaaggtcacacattatgaaaatctgtagccacataacaag 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 agcttacattacttaaagactaaggtcacacattatgaaaatctgtagccacataacaag 476

                                                                       
Query: 304 ccaagtatggtggctcatgatgggagaagagaaaagagaggtttttgtcttgctggtcaa 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 ccaagtatggtggctcatgatgggagaagagaaaagagaggtttttgtcttgctggtcaa 416

                                                                       
Query: 364 catcaggttgaataacactgtcttacaagtaaacaagtggaaagcaatgggggaagacaa 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 catcaggttgaataacactgtcttacaagtaaacaagtggaaagcaatgggggaagacaa 356

                                                                       
Query: 424 cttgacatcaacctctggcctcatcccatgtatacatggtaagtacacctacactcacaa 483
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 cttgacatcaacctctggcctcatcccatgtatacatggtaagtacacctacactcacaa 296

                                                                       
Query: 484 atgcacccagacatgaacatgcaccaccctgtgcaccacacagaaataacagacagaaaa 543
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 atgcacccagacatgaacatgcaccaccctgtgcaccacacagaaataacagacagaaaa 236

                                                                       
Query: 544 atgtaaaacaataagttaacagaggaacttcattaatcctaaagaaaggcagggatccgt 603
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 235 atgtaaaacaataagttaacagaggaacttcattaatcctaaagaaaggcagggatccgt 176


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 603
Length of database: 1003
Length adjustment: 10
Effective length of query: 593
Effective length of database: 993
Effective search space:   588849
Effective search space used:   588849
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no056_p18.g1 MSMg01no056_p18.g1 CHROMAT_FILE:
MSMg01no056_p18.g1 PHD_FILE: MSMg01no056_p18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:58:47 2005
         (509 letters)



>mm_chr1_66700837_66701745
          Length = 909

 Score =  977 bits (505), Expect = 0.0
 Identities = 508/509 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   agaagaccccgggaatctctgctgaacatttgcacggaattctataaccactgcgggccg 60
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 201 agaagaccccgggaatctctgctgaacatttgcacggaattctataagcactgcgggccg 260

                                                                       
Query: 61  aggctgaagatcctgcaaaacctagctggggagccacgggtcactgccctggagctgctg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aggctgaagatcctgcaaaacctagctggggagccacgggtcactgccctggagctgctg 320

                                                                       
Query: 121 gatgtgaagtctcacatgaggtacccacgcaagtgcctcacctctgcctgggatgctaag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gatgtgaagtctcacatgaggtacccacgcaagtgcctcacctctgcctgggatgctaag 380

                                                                       
Query: 181 agcttaagccatgtgtctgtgtctgtgtgctgggatgaaccaggaagtgggggatgctct 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agcttaagccatgtgtctgtgtctgtgtgctgggatgaaccaggaagtgggggatgctct 440

                                                                       
Query: 241 gggagtgggaaggcttcctccaggaaaaggaaggagattcttagaataatttgtttcctg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gggagtgggaaggcttcctccaggaaaaggaaggagattcttagaataatttgtttcctg 500

                                                                       
Query: 301 tgacttgggtacataccatttagatccttctggtaaagtacacattttatctattaaaga 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tgacttgggtacataccatttagatccttctggtaaagtacacattttatctattaaaga 560

                                                                       
Query: 361 gatctcagaaatagaaaatgttttaaaaatgggaattcagtctgtaacttactgtctggc 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gatctcagaaatagaaaatgttttaaaaatgggaattcagtctgtaacttactgtctggc 620

                                                                       
Query: 421 agatttttaaatgtgatcccagaggacctagtagctgatttctagcagtttttaaaggat 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 agatttttaaatgtgatcccagaggacctagtagctgatttctagcagtttttaaaggat 680

                                        
Query: 481 cataagaattccttcaaagaaaaagttca 509
           |||||||||||||||||||||||||||||
Sbjct: 681 cataagaattccttcaaagaaaaagttca 709


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 509
Length of database: 909
Length adjustment: 10
Effective length of query: 499
Effective length of database: 899
Effective search space:   448601
Effective search space used:   448601
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)