TGCGGCCGCTATACGACTCCTATTCCAAGAGGAGCCGCGGAATTCGGTTT
TCTCCGAAAAACGGTCGAGGGCAAGGTCTCTGTGAAAAGTTACATCTGAG
GTAAGAAATGATTGAAATTTGCTCAATAAAAAATATTAAAAAGATACTGA
GTTAAGCGTGAGGATGAGAAGATATGTTACCTAAGTGAATTATACTATTA
AATATTGTGATTTTCTGAGATAGTTTCACAATCTTACATTTAAGCACATG
CACCCAAACACACAACTCCCCTTACATACGCGTTCATCCAAATTACTTAA
AAATGTTCTAACTACAATTTTTATTTTATTATCTAAATATATCATTTTCA
GGAAAATAATCATTAATTTTAAAAACATTTTAGAAAAATCTTTAGCAATA
TAAAGATCGAATTTAAACATCTTGATATGCTTAACTCCACAGACCTGAGT
TGGGTGAGTGCTTGTATTTGTGTCTAAATCATCTTCATTTTGGTTAGGAG
TTGTTAAAGGGATAGAGTTCAGACCCAGGTATATATCAATGCAAGTATAT
ATCTATGAAGTCACAAGTATACTACGTATAGCAGTCTCTGTAGATTTTTC
TCTCACAACTTTCACAAACATTTTTCTTCTATCCCATACTCCTATGCTTA
AAATCTCAGTGAATCTGCAGCTACTTCCAATGGATAT

TGGCGGCCGCCTGTTCTAAAATTGAGGTGACCTATAGAAGTTCCGCGAAA
TTCTTGATCTTTCCAAGATGTTAACATCATGAAATATTATATTTTGTCAA
ACCCCTTTTCAGCATCTAAAGAGTTTTTAGTGAACATGTGGTTTTTTTCC
CTTTGAATTTATATATATATATATATATATATATATATAAAATATTCCAA
TACATATTGGAATATTTTGATGGATTTCCACATCTTGAACCATCCCTACA
TCCCTAGGATGAAGCTTACTTGATCAACTTGGTGAATGTTGATTTTTATG
TGTTCCTGGATTTGGTTTGCAAGAACTTTATTGAATTTTTTAATAAATAT
TCATAAGGAAAGTCAACTAGAGTATTTCTTCTTCCTTGGGTCTTTGTGTG
GTTTAAGTATCAGCTTACCTGTAACTTCATAGAACAAAGGTACTATTCTT
TCTGTTTTTATTTGATAGGATTGTTTGAGAAGCATTGGTGTTAGGTTTTT
TTTGAAAATATGATAGAATTGTGCCCTAAAACCATCTGACCTTGAGATTT
TTTTGGATGGGAGACTTTTAATGACTGCTTTGAATTTCATTGGGGTTATC
AGACTGTTTAGATAGGTTAACTGATCCTGATTTAACTTTGATATCTGCCA
TCAGTCTAAGAAATTTTCCATTTA

Query= MSMg01no057_a14.b1 MSMg01no057_a14.b1 CHROMAT_FILE:
MSMg01no057_a14.b1 PHD_FILE: MSMg01no057_a14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:58:51 2005
         (525 letters)



>mm_chr1_110502613_110503539
          Length = 927

 Score =  926 bits (479), Expect = 0.0
 Identities = 515/527 (97%), Gaps = 2/527 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   aaaacggtcgagggcaaggtctctgtgaaaag-ttacatctgaggtaagaaatgattgaa 59
           ||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 727 aaaacagtcgagggcaaggtctctgtgaaaagtttacatctgaggtaagaaatgattgaa 668

                                                                       
Query: 60  atttgctcaataaaaaatattaaaaagatactgagttaagcgtgaggatgagaagatatg 119
           ||||||||||||| ||||||||||||||||||||||||||| || |||||||||||||||
Sbjct: 667 atttgctcaataagaaatattaaaaagatactgagttaagcatggggatgagaagatatg 608

                                                                       
Query: 120 ttacctaagtgaattatactattaaatattgtga-ttttctgagatagtttcacaatctt 178
           ||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||
Sbjct: 607 ttacctaagtgaattatactattgaatattgtgatttttctgagatagtttcacaatctt 548

                                                                       
Query: 179 acatttaagcacatgcacccaaacacacaactccccttacatacgcgttcatccaaatta 238
           ||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||
Sbjct: 547 acatttaagcacatgcacccaaacacacaactccccttacatatgtgttcatccaaatta 488

                                                                       
Query: 239 cttaaaaatgttctaactacaatttttattttattatctaaatatatcattttcaggaaa 298
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 487 cttaaaaatgttctaactacaatttttattttattatttaaatatatcattttcaggaaa 428

                                                                       
Query: 299 ataatcattaattttaaaaacattttagaaaaatctttagcaatataaagatcgaattta 358
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 427 ataatcattaattttaaaaacattttagaaaaatctttagcaatataaagattgaattta 368

                                                                       
Query: 359 aacatcttgatatgcttaactccacagacctgagttgggtgagtgcttgtatttgtgtct 418
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 aacatcttgatatgcttaactccacagacctgagttgggtgagtgcttgtatttgtgtct 308

                                                                       
Query: 419 aaatcatcttcattttggttaggagttgttaaagggatagagttcagacccaggtatata 478
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 307 aaatcatcttcattttggttaggagttgttaaagggatagagttcagacacaggtatata 248

                                                          
Query: 479 tcaatgcaagtatatatctatgaagtcacaagtatactacgtatagc 525
           |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 tcaatgcaagtatatatctatgaagtcacaagtatactacgtatagc 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 525
Length of database: 927
Length adjustment: 10
Effective length of query: 515
Effective length of database: 917
Effective search space:   472255
Effective search space used:   472255
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)