CAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATT
CTTTATGTATTTCCGCAATTAGCCCTCTATTGGATGTAGAATTTGTGAAG
AATTTTTTTCCAATCTGTAGGTTGCTGATTTGTCATATTGACTATGTCCT
TTGCCTTACAGAAGCTTTTCTTGATGTTCCATTTGTCAATTTTTGATCTT
AGAGCCTGAGCCATTGGTGTTCTGCCTGCCCGTGCCAATAAGTTCAAGGC
TCTTTCCCACTTTCTCTTTTATTAGATTCAGTGTATCTGGTTTTATGTTG
AGGTCCTTGATCCACTTGGAATTGAGTTTTATGCAAGGTGACAAAAAATA
GATTAATTTTCATTTTTCTACATACAGACTGTCAGTTAGACCTGTACCAT
TTATTGAAGATGGCTTCTTTTTTTGCTTTTTCCAATTTTTTATTAGATAA
TTTCTTCATTTATATTTCAAATGCTATCCTGAAAGTCCCTTATACCCCCC
CCTGCCCCCTGCAATCCCCTACCCACCCACTCGCACTTCTTGGCCCTGGT
GTCCTCCTATACTGGGGCATATAAAGTTTTCAAGATCAAGGGGTCTCTCT
TCCCAGTGATGGCCAATTAGGCCATGAAGATGGCTTCTTTTTTCCGTTTT
TTGGCTTCTTTGTCAAAGATCAGATAAGTCTATACTGG

CAATGAAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXAAAGGTTAAATAATCACTCATAAAAGA
CATTGGACAAATGAGATGGTAAAAATCTTTTCCCCTGACATTTAGATATC
ACAAGCAAAATTCAGTTTCAGTAATTGTAATCCATTTAATGCCGCTTTTA
GAAGATTGATACTTGGTGGTTTGTCAACTGACATTTGCAAGCAGACCAAA
CTTTTATTTCACTTTGTTTAGATATAACTAAAAGAAATAAAATTTAGTTA
AGATAAAAATACAGGAAGGGAAAATGGAAAAGTAATTTACCTATAATTGA
CAGAAATAAATTTCTGTAGAATACTTTTTATCTAGATAGCTAAATTTCAT
AACAAATCTAACCAGCTTAACACAATGAAAAATTTATTAAAAATCCTTGA
GCGTTTAAAATATTTTGATAATTTACTTGATAATTTTTATTATAACTGAT
AAATATAATTATATGGAAAATAATATTAAAGCATAAATACTATTTCTAAA
TCTAATGTTAAATATCTGTGTGTTTTCATTTAGTTTTCATAGGAAATCTT
ATTAAAAATACTTAGAATCTTTGTCAGTTGGGTTTGAGCTATTATGTTGC
TTAGGGCACCACATATTAAGAATGGCCAGTTGTCTCACTTT

Query= MSMg01no057_o20.g1 MSMg01no057_o20.g1 CHROMAT_FILE:
MSMg01no057_o20.g1 PHD_FILE: MSMg01no057_o20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:00:03 2005
         (579 letters)



>mm_chr1_50626761_50627739
          Length = 979

 Score = 1089 bits (563), Expect = 0.0
 Identities = 575/579 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   aaaggttaaataatcactcataaaagacattggacaaatgagatggtaaaaatcttttcc 60
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 201 aaaggttaaataatcactcataaaagacattggacaaatgagatggtaaaaatctttttc 260

                                                                       
Query: 61  cctgacatttagatatcacaagcaaaattcagtttcagtaattgtaatccatttaatgcc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cctgacatttagatatcacaagcaaaattcagtttcagtaattgtaatccatttaatgcc 320

                                                                       
Query: 121 gcttttagaagattgatacttggtggtttgtcaactgacatttgcaagcagaccaaactt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gcttttagaagattgatacttggtggtttgtcaactgacatttgcaagcagaccaaactt 380

                                                                       
Query: 181 ttatttcactttgtttagatataactaaaagaaataaaatttagttaagataaaaataca 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttatttcactttgtttagatataactaaaagaaataaaatttagttaagataaaaataca 440

                                                                       
Query: 241 ggaagggaaaatggaaaagtaatttacctataattgacagaaataaatttctgtagaata 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ggaagggaaaatggaaaagtaatttacctataattgacagaaataaatttctgtagaata 500

                                                                       
Query: 301 ctttttatctagatagctaaatttcataacaaatctaaccagcttaacacaatgaaaaat 360
           |||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 501 ctttttctctagatagctaaatttcataacaaatctaaccagcttaacataatgaaaaat 560

                                                                       
Query: 361 ttattaaaaatccttgagcgtttaaaatattttgataatttacttgataatttttattat 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttattaaaaatccttgagcgtttaaaatattttgataatttacttgataatttttattat 620

                                                                       
Query: 421 aactgataaatataattatatggaaaataatattaaagcataaatactatttctaaatct 480
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aactgataaatataatgatatggaaaataatattaaagcataaatactatttctaaatct 680

                                                                       
Query: 481 aatgttaaatatctgtgtgttttcatttagttttcataggaaatcttattaaaaatactt 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 aatgttaaatatctgtgtgttttcatttagttttcataggaaatcttattaaaaatactt 740

                                                  
Query: 541 agaatctttgtcagttgggtttgagctattatgttgctt 579
           |||||||||||||||||||||||||||||||||||||||
Sbjct: 741 agaatctttgtcagttgggtttgagctattatgttgctt 779


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 579
Length of database: 979
Length adjustment: 10
Effective length of query: 569
Effective length of database: 969
Effective search space:   551361
Effective search space used:   551361
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)