Query= MSMg01no059_a18.b1 MSMg01no059_a18.b1 CHROMAT_FILE:
MSMg01no059_a18.b1 PHD_FILE: MSMg01no059_a18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:01:27 2005
(663 letters)
>mm_chr1_72917765_72918835
Length = 1071
Score = 1100 bits (569), Expect = 0.0
Identities = 607/623 (97%), Gaps = 9/623 (1%)
Strand = Plus / Minus
Query: 4 gaattctctgcagtc-taccaaccagaagcaacaccctctcctcgccctcactccaaccc 62
||||||||||||| | | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 gaattctctgcagccgaagcaaccagaagcaacaccctctcctcgccctcactccaaccc 563
Query: 63 cagcccgcgtcaggcaggtgcctaacagcctacaattgcaccctggctgccgaccacagt 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 cagcccgcgtcaggcaggtgcctaacagcctacaattgcaccctggctgccgaccacagt 503
Query: 123 ggcaaaggttaataccttcctccggaatgggagccggctctcggagaagatccttcgagc 182
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 502 ggcaaaggttaataccttcctcccgaatgggagccggctctcggagaagatccttcgagc 443
Query: 183 cattatttggatg------cccccccc-aaaaaaagctaaagatgacgtcattcttaaag 235
||||||||||||| |||||||| ||||||||||||||||||||||||||||||||
Sbjct: 442 cattatttggatgcccaccccccccccaaaaaaaagctaaagatgacgtcattcttaaag 383
Query: 236 aaaggaaaatggataatgaagagaggagattgtcttctgggtcctttaggagaaattctt 295
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 aaaggaaaatggataatgaagagaggagattgtcttctgggtcctttaggagaaattctt 323
Query: 296 gctccctaggccccctcccccaccactgaaatctgagtagtgtgagcttggacaatcctc 355
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 gctccctaggccccctcccccaccactgaaatctgagtagtgtgagcttggacaatcctc 263
Query: 356 ttctcccgcagttggaacctataatatacatatgttgtatttatatttggtatgcaacca 415
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 ttctcccgcagttggaagctataatatacatatgttgtatttatatttggtatgcaacca 203
Query: 416 aaaatatatattatatattcatattattatattatgtaacaccccccaccccccagtaca 475
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 202 aaaatatatattatatattcatattattatattatgtaacaccccc-accccccagtaca 144
Query: 476 gtgagtttctagattgagaagtgaggagcgaaggagaggtggctggcagccaaagcttcg 535
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143 gtgagtttctagattgagaagtgaggagcgaaggagaggtggctggcagccaaagcttcg 84
Query: 536 ggagagggaggtgtacgcaggcaggcagagcccggggttttgctggttgcgttgcttggc 595
|||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||
Sbjct: 83 ggagagggaggtgtacgcaggcaggcggagcctggggttttgctggttgcgttgcttggc 24
Query: 596 aactggagagggagtcgcctaga 618
|||||||||||||||||||||||
Sbjct: 23 aactggagagggagtcgcctaga 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 663
Length of database: 1071
Length adjustment: 10
Effective length of query: 653
Effective length of database: 1061
Effective search space: 692833
Effective search space used: 692833
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no059_a18.g1 MSMg01no059_a18.g1 CHROMAT_FILE:
MSMg01no059_a18.g1 PHD_FILE: MSMg01no059_a18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:01:27 2005
(498 letters)
>mm_chr1_72804301_72805198
Length = 898
Score = 897 bits (464), Expect = 0.0
Identities = 489/498 (98%), Gaps = 2/498 (0%)
Strand = Plus / Plus
Query: 1 tttctggctataaatcatgaggaagttcttttttgtataggcactcataaaataatctcc 60
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 201 tttctggctataaatcatgaggaagttcttttttgtacaggcactcataaaataatctcc 260
Query: 61 aagatattgcttagagaaaacaataaggtaaaaagtaggaggttcagtgagctattgtgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aagatattgcttagagaaaacaataaggtaaaaagtaggaggttcagtgagctattgtgt 320
Query: 121 ttgcaaagtaaacccaagcattgtggtgattgcctgtaagtccaggatttgggtggtgga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttgcaaagtaaacccaagcattgtggtgattgcctgtaagtccaggatttgggtggtgga 380
Query: 181 ggcaggaagatcaggaaccaaggttatccttgactccatggtgagttgcagtctagcctg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggcaggaagatcaggaaccaaggttatccttgactccatggtgagttgcagtctagcctg 440
Query: 241 ggctacaggagattctttcttaaaaacgaaaaagagtgtgaagaggtagggataaaaaga 300
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 441 ggctacaggagattctttcttaaaaacgaaaaagaatgtgaagaggtagggataaaaaga 500
Query: 301 atatgctctgtgtgcatatatgtgtgcatctgtgtgcacatatgtccgcatatgtgtgtg 360
||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||
Sbjct: 501 atatgctctgtgtgcatatatgtgtgcatctgtgtgcacatatgtttgtatatgtgtgtg 560
Query: 361 catgtgtgtatgcatgtgtattgatgtgtgcagtgtgtgtgcatgtgtgaatatgtatat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 catgtgtgtatgcatgtgtattgatgtgtgcagtgtgtgtgcatgtgtgaatatgtatat 620
Query: 421 gcatatgtgtgtttacatgtgtgtgcatgtgtgtatatgaatttgtgtgtgtggggtgcg 480
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 621 gcatatgtgtgtttacatgtgtgtgcatgtgtgtatatgcatttgtgtgtgtggggtgca 680
Query: 481 tgtgtgtgtgtatgtgtg 498
||||||||| |||||||
Sbjct: 681 tgtgtgtgt--atgtgtg 696
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 498
Length of database: 898
Length adjustment: 10
Effective length of query: 488
Effective length of database: 888
Effective search space: 433344
Effective search space used: 433344
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
