CATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCGAAGACGGCGGAATT
CCTCTAGAATCTACCATATATGCAGTCAGTATTAAAATAAAGATATATAT
ATATATTAAGATATATATATATATAAAGATATATATATATATATATATAT
ATATATATATATATATATATATATATATATATATATATATATATGTATAT
ATATATATGATATATATATATATATAGAGAGAGAGAGAGAGAGGGGGCGA
GTGGGTGAGCGCGTGCGCGTGCGGGTGCGCGCGCGCGCGCGCGGGGGGGG
GGGGGGGGGGGGCGAGCGCGTGTGTGCGCGCGAGCGCGGGCGCGCGGGAG
CGCTCCCGCGCCGCGGGCCCGCGGGGAGTGCGCGCTGGGGCGCGCTGCGC
GCGCGGGGTGGGCCCCCCCCGGGGGGGGTAAGAGTAGTGGGGGGGGGGGC
CGGGGCGTCCGCGCGCCGCGCCTGCGCGCGCGTGCCGCCGCGGGTGGCGG
TCGGCGGGGCGCGCGCCGTCGGGGCGGCTGTGGGCGGTGGGCGCGCTGGG
GCGGTGCGGGTCCTCTCCTGCCGGGGGGGGTGTTGCCTGCGGCGGGCGGG
CGCGCGCCGGGAGCTGGGGGGCGGGGCGCGGGCGTGGCGGGCGCCGCGGT
CCCTGGGGGCGCCGGCGTTGTGGGGCGCGCGTTCGGGGCGGGGCTCGGAT
CGGGGGGGGCGCGGGGGGCGGTAGGCCGGCTTGGGGCTCGGCGCCGCTGG
GGTG

ATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXATGAGCAGTGCAGAGACATTTTGTATAAGG
AGTTTACTTCATGCAGTACATGAAGGAGGGACAGAGTCTTTAAAAGCAAG
CCTGGGAGTGAGGGAGCAGACGGTGGGGAGGACACCCATAGTGCTCTTGT
TTCTACCCTGTAAAGATGCAGCTGGGATGCCTGTCTAGACAACCACTGGC
CACACCATCAGACTGTCAATCAGGCAAGTTATCCAAGGTTAGCCACACCC
AGAGACCTCCTAGTAAAAACTAGGTGTTCATTAATGCATTATTGTCTTTT
ATATTTCATTTGACTAGTCAATTTATAAATCTCTTCTTAGATTTTAGGCT
TCCCAGAGATTTGAACACATGTGAGTGGCTCTTTCCTTCCCTCTCTTTTT
CTTTTTCCTCCTCTCTTCTTTCGTCCCTCCCTCCCATCCTCCTCTCTCTT
CCTTCTTTCCCTCCCCACCTCTCTACTATCTTACTTCCCTCCTACCTATT
TTCCTTTATCTTATTTCATGAGTGTTTCTGTTATAGATGTACGAAAGCAC
ACATGGCTATCATCTATTTATCTAGCCATCCATCCACCCACCCATCCATC
CACTCACCCACCCATCCATCCACCCATCCATCCATCCATCCATCCATCCA
TTGATATCTATCTATCTATCTATCTATCT

Query= MSMg01no059_a20.g1 MSMg01no059_a20.g1 CHROMAT_FILE:
MSMg01no059_a20.g1 PHD_FILE: MSMg01no059_a20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:01:28 2005
         (659 letters)



>mm_chr1_128596399_128597457
          Length = 1059

 Score = 1065 bits (551), Expect = 0.0
 Identities = 557/559 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   atgagcagtgcagagacattttgtataaggagtttacttcatgcagtacatgaaggaggg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 atgagcagtgcagagacattttgtataaggagtttacttcatgcagtacatgaaggaggg 500

                                                                       
Query: 61  acagagtctttaaaagcaagcctgggagtgagggagcagacggtggggaggacacccata 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 acagagtctttaaaagcaagcctgggagtgagggagcagacggtggggaggacacccata 440

                                                                       
Query: 121 gtgctcttgtttctaccctgtaaagatgcagctgggatgcctgtctagacaaccactggc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 gtgctcttgtttctaccctgtaaagatgcagctgggatgcctgtctagacaaccactggc 380

                                                                       
Query: 181 cacaccatcagactgtcaatcaggcaagttatccaaggttagccacacccagagacctcc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 cacaccatcagactgtcaatcaggcaagttatccaaggttagccacacccagagacctcc 320

                                                                       
Query: 241 tagtaaaaactaggtgttcattaatgcattattgtcttttatatttcatttgactagtca 300
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 319 tagtaaaaactaggtgttcattaatgcactattgtcttttatatttcatttgactagtca 260

                                                                       
Query: 301 atttataaatctcttcttagattttaggcttcccagagatttgaacacatgtgagtggct 360
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 259 atttataaatctcttcttagattttaggcttcccagagatttgaacatatgtgagtggct 200

                                                                       
Query: 361 ctttccttccctctctttttctttttcctcctctcttctttcgtccctccctcccatcct 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199 ctttccttccctctctttttctttttcctcctctcttctttcgtccctccctcccatcct 140

                                                                       
Query: 421 cctctctcttccttctttccctccccacctctctactatcttacttccctcctacctatt 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 139 cctctctcttccttctttccctccccacctctctactatcttacttccctcctacctatt 80

                                                                       
Query: 481 ttcctttatcttatttcatgagtgtttctgttatagatgtacgaaagcacacatggctat 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 79  ttcctttatcttatttcatgagtgtttctgttatagatgtacgaaagcacacatggctat 20

                              
Query: 541 catctatttatctagccat 559
           |||||||||||||||||||
Sbjct: 19  catctatttatctagccat 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 659
Length of database: 1059
Length adjustment: 10
Effective length of query: 649
Effective length of database: 1049
Effective search space:   680801
Effective search space used:   680801
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)