ATCATAATTTGCGGCGCTAAACGACTCCTATTTCAAGAAGAGCGCGGAAT
TCTTGTTTTTCCCAGAAAATAGTGCTTCTATTCTATTAGTGGAAAAGAAA
ATAAAAATCTACTCATCACCGAAATATTTCATTGACACACAGTTGTTTGC
ATTTGAGTCAGGTGGGCTTCTCAGTGCTTAATACATATTTTTTTAATGGT
TTTGAAAGAGACCCTAGAGCATATTTTCTTTAAAGGCAAAATGTATACTT
GTTTATCCAAGGGAAGTCAACACTTAGCAAATAAGGTGGAGCATTAGAGC
CTACTACATGTTTCATTGCTGGTACAGAAAGACTAAAGCAAAGAAAAGTG
ACACAAAGTCCGGAATCTGCTGCGCCCGGTCCTTCTTGTCCCTGTCACTT
ACACACACTGTTCTGCTCCCTTCATCAAGAACTTCACAGCTGGGTGTGGT
GGCAGTAATCCCAGCGCTTGAGAGCCTGAGTCAGGAGGATTTTGAGTTTG
AGGATAGCCAAGGCTCCACCCCAAGATCCTGTCTCAAACACTTCCCCACC
AGATTCCTCCCACTCAAAAATAATAATAATAATAAAACAGAAATCTACTA
AAATTTTGATGTTTGTAATTGGTTTTTAAAATCTTCCACTAACTTGCTAT
TGCCTCCAGTAAGGTTTCACTACCTCCCTCTTGTCAATTTCACCAAGTCC

CGATGCTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXTTTCCAGGAATTCCTCCCAAGATCAAATTCACAAACCCTGGCA
TCTCCATTGGAGATGTGGCAAAAAAGCTGGGTGAGATGTGGAAGAACTTG
AGTGACAGTGAAGCAGCCTACGTCACCAAGGCAGCAAAGCTGAAGGAGAA
GGATGAGAAGGGTGTCTCTGACTGGCAGTCTAAAGGGAAGTTTGAGGGGG
CCAAGGGGTCTGCTAAAGTTGCCCGGAAAAAGGTGGAGGAGGCGCCNTTT
CTACCCCTCTCTCTTTTTTTTTTCTTTTCACCATTCCCTATCCTTTCTTT
CCTTCTCTTTTTTCCTCCCCCCCTCTTTCCTTTTTTTTTGTCTCTTTCTC
CTTTTTTTATTTCTTTATTCTCCCCCTTCTTATCTATTTTCAACTTCATT
ATCCTCTCCCATCTCATTCTTATACCATCTTATTACCTTTCTTCTCTCTC
CTTCTTCTCTTTCCTTCTCCCTTATACACTTATTCCTTTCTCTTCCCTTT
CTCATTTTCTTTCTTTCCTCCTTTTTTTAACATTCTATCGATCTCCCCCC
CCTTATTTTTTTCGCCTTCCGCTTTTTTGTTCGCCCCGCTTCATTTCACT
TTCCCTTCCCCACTTTCACTTTATATTTCTTTTCCCTACTAATCCCTTGA
CCCTTTACCTTTCTTATTTGTCCACCATTATTCACCTTTAACCTCCTCAG
TACACCATCTC

Query= MSMg01no059_d05.b1 MSMg01no059_d05.b1 CHROMAT_FILE:
MSMg01no059_d05.b1 PHD_FILE: MSMg01no059_d05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:01:39 2005
         (543 letters)



>mm_chr1_157145853_157146795
          Length = 943

 Score = 1050 bits (543), Expect = 0.0
 Identities = 543/543 (100%)
 Strand = Plus / Minus

                                                                       
Query: 1   aatagtgcttctattctattagtggaaaagaaaataaaaatctactcatcaccgaaatat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 570 aatagtgcttctattctattagtggaaaagaaaataaaaatctactcatcaccgaaatat 511

                                                                       
Query: 61  ttcattgacacacagttgtttgcatttgagtcaggtgggcttctcagtgcttaatacata 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 ttcattgacacacagttgtttgcatttgagtcaggtgggcttctcagtgcttaatacata 451

                                                                       
Query: 121 tttttttaatggttttgaaagagaccctagagcatattttctttaaaggcaaaatgtata 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 tttttttaatggttttgaaagagaccctagagcatattttctttaaaggcaaaatgtata 391

                                                                       
Query: 181 cttgtttatccaagggaagtcaacacttagcaaataaggtggagcattagagcctactac 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 cttgtttatccaagggaagtcaacacttagcaaataaggtggagcattagagcctactac 331

                                                                       
Query: 241 atgtttcattgctggtacagaaagactaaagcaaagaaaagtgacacaaagtccggaatc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 atgtttcattgctggtacagaaagactaaagcaaagaaaagtgacacaaagtccggaatc 271

                                                                       
Query: 301 tgctgcgcccggtccttcttgtccctgtcacttacacacactgttctgctcccttcatca 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 tgctgcgcccggtccttcttgtccctgtcacttacacacactgttctgctcccttcatca 211

                                                                       
Query: 361 agaacttcacagctgggtgtggtggcagtaatcccagcgcttgagagcctgagtcaggag 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 210 agaacttcacagctgggtgtggtggcagtaatcccagcgcttgagagcctgagtcaggag 151

                                                                       
Query: 421 gattttgagtttgaggatagccaaggctccaccccaagatcctgtctcaaacacttcccc 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 150 gattttgagtttgaggatagccaaggctccaccccaagatcctgtctcaaacacttcccc 91

                                                                       
Query: 481 accagattcctcccactcaaaaataataataataataaaacagaaatctactaaaatttt 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 90  accagattcctcccactcaaaaataataataataataaaacagaaatctactaaaatttt 31

              
Query: 541 gat 543
           |||
Sbjct: 30  gat 28


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 543
Length of database: 943
Length adjustment: 10
Effective length of query: 533
Effective length of database: 933
Effective search space:   497289
Effective search space used:   497289
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)