NATTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGCCGC
GGAATTCTAACAAGTTCCACTGACATTTATAAATCAGTCAGCACCAGATA
TTAGAAGGAAGTTAAAGAACTTAGAAACATTAGGGGAAAAGTCATTGAGA
GATTTTGTGGAGGTTTCGGAGAAAGTGTACTATATTAGGGTACACTTGCA
GAATATTGTTGAAGGGAAAGAGCCTAAGGGAGGTTGTAGACCAATCTTAG
GTAAAAACCAATGTTTCTACTGAAGGACATTGGGCAGAAACCAGATCCAG
GTGCTTAGCAAAGCATCGACCCCCTGTGTTTATAGAGCTTTAACTGGTTG
TATACCCAGTACAAGTCTGCCAATACCCCATGTGTCAAAAGGCACGAAAG
GGTATCATCATCCCCCATATCACAAAGATGCTGGCTTTGGGAGTACTCAG
GCATGTCAATAGGCCTGGAATACTCCATTATTGCCAGTGAAGAAGCCAAA
TTTCAACGACTATCACCCTGTCCAGGACCTACAGGAAGTTAAGTGCAGAG
TAATGGACATACACCCCACAGTGCCTAATCCTTATACCCTATTGAGCTCT
CTGGCACCAGATCTGGACTAGTATTTGGTAATAGACCTAAAGAATGGATG
CTTTCTTCAGTTTACTCTTGATTCCCAAACGCCAGATATATTTTGCCTTT
GAATGGTGTGATCCC

NCCGATGAAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXTCACCTGAGGAATACCGAAAGGCAGA
GAAGCACCTGAAAAAATGCTCAACATCCTTAATCATCAGGGAAATGCAAA
TCAAAACAACCCTGAGATTCCACCTCACACCAGTCAGAATGGCTAAGATC
AAAAATTCAGGTGACAGCAGATGCTGCCGTGGATGTGGAGAAAGAGGAAC
ACTCCTCCATTGTTGGTGGGATTGCAGGCTTGTACAACCACTCTGGAAAT
CAGTCTGGTGGTTCCTCAGAAAACTGGATATAGTACTACCGGAGGATCCA
GCAATACCTCTCCTGGGCATATATCCAGAAGATGCCCCAACTGGTAAGAA
GGACACATGCTCCACTATGTTCATAGCAGCCTTATTTATAATAGCCAGAA
GCTGGAAGGAACCCAGATGCCCCTCAACAGAGGAATGGATACAGAAAATG
TGGTACATCTACACAATGGAGTACTACTCAGCTATTAAAAAGAATGAATT
TATGAAATTCCTAGCCAAATGGATGGACCTGGAGGGCATCATCCTGAGTG
AGGTAACACATTCACAAAGGAACTCACACAATATGTACTTCCTGATAAGT
GGATATTAGCCCATAACCTAAGATACCCAAGATATAAGATACAATTTCCT
AAACATATGAAACT

Query= MSMg01no059_g08.b1 MSMg01no059_g08.b1 CHROMAT_FILE:
MSMg01no059_g08.b1 PHD_FILE: MSMg01no059_g08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:01:53 2005
         (627 letters)



>mm_chr1_101408913_101409939
          Length = 1027

 Score = 1058 bits (547), Expect = 0.0
 Identities = 607/627 (96%)
 Strand = Plus / Plus

                                                                       
Query: 1   tgacatttataaatcagtcagcaccagatattagaaggaagttaaagaacttagaaacat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgacatttataaatcagtcagcaccagatattagaaggaagttaaagaacttagaaacat 260

                                                                       
Query: 61  taggggaaaagtcattgagagattttgtggaggtttcggagaaagtgtactatattaggg 120
           |||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||
Sbjct: 261 taggggaaaagtcattgagagattttgtggaggtttcggagaaagtgtgccatattaggg 320

                                                                       
Query: 121 tacacttgcagaatattgttgaagggaaagagcctaagggaggttgtagaccaatcttag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tacacttgcagaatattgttgaagggaaagagcctaagggaggttgtagaccaatcttag 380

                                                                       
Query: 181 gtaaaaaccaatgtttctactgaaggacattgggcagaaaccagatccaggtgcttagca 240
           ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||
Sbjct: 381 gtaaaaaccaatgtttctactgaaggacattgggcagaaactagatccaggtgcttggca 440

                                                                       
Query: 241 aagcatcgaccccctgtgtttatagagctttaactggttgtatacccagtacaagtctgc 300
           ||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 441 aagcatcgacctcctgtgtttatagagctttaactggttttatacccagtacaagtctgc 500

                                                                       
Query: 301 caataccccatgtgtcaaaaggcacgaaagggtatcatcatcccccatatcacaaagatg 360
           ||||| |||||||||||| ||||||||||||||||||||||||| ||| ||| |||| ||
Sbjct: 501 caatatcccatgtgtcaagaggcacgaaagggtatcatcatccctcatttcagaaagctg 560

                                                                       
Query: 361 ctggctttgggagtactcaggcatgtcaataggcctggaatactccattattgccagtga 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ctggctttgggagtactcaggcatgtcaataggcctggaatactccattattgccagtga 620

                                                                       
Query: 421 agaagccaaatttcaacgactatcaccctgtccaggacctacaggaagttaagtgcagag 480
           |||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 621 agaaaccaaatttcaacgactatcaccctgtccaggacctacaggaagttaagttcagag 680

                                                                       
Query: 481 taatggacatacaccccacagtgcctaatccttataccctattgagctctctggcaccag 540
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 taatggacatacacaccacagtgcctaatccttataccctattgagctctctggcaccag 740

                                                                       
Query: 541 atctggactagtatttggtaatagacctaaagaatggatgctttcttcagtttactcttg 600
           ||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 741 atctgaactagtatttggtaatagacctaaagaatgaatgctttcttcagtttactcttg 800

                                      
Query: 601 attcccaaacgccagatatattttgcc 627
            |||| |||||||||| ||||||||||
Sbjct: 801 gttccaaaacgccagaaatattttgcc 827


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 627
Length of database: 1027
Length adjustment: 10
Effective length of query: 617
Effective length of database: 1017
Effective search space:   627489
Effective search space used:   627489
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)