Query= MSMg01no059_h13.b1 MSMg01no059_h13.b1 CHROMAT_FILE:
MSMg01no059_h13.b1 PHD_FILE: MSMg01no059_h13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:01:59 2005
(510 letters)
>mm_chr1_73538336_73539244
Length = 909
Score = 909 bits (470), Expect = 0.0
Identities = 500/510 (98%), Gaps = 1/510 (0%)
Strand = Plus / Plus
Query: 1 gaaactttatggacggttagctctctcacctatcccctctcccagccaccatgccactct 60
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gaaactttatggatggttagctctctcacctatcccctctcccagccaccatgccactct 260
Query: 61 gcttctgtcatttccactattttaaacacaaatgattctgacttgtgcatgtgtgcacac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gcttctgtcatttccactattttaaacacaaatgattctgacttgtgcatgtgtgcacac 320
Query: 121 attgtacatgtgtggctctttgctgtcttctgcaaaccaattttatcatcttgctagctt 180
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 321 attgtacatgtgtggctctttgctgtcttctgcaaaccaattgtatcatcttgctagctt 380
Query: 181 aatgaactactgggcagtataaaaacctctggcatgttactttacaatgtgtaagggttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aatgaactactgggcagtataaaaacctctggcatgttactttacaatgtgtaagggttg 440
Query: 241 tctttttttgttctcctgaagattaattcactaacaaggacatgccacatgtcagtttac 300
|||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tctttttttgccc-cctgaagattaattcactaacaaggacatgccacatgtcagtttac 499
Query: 301 ccggttgttcaacataaaggagatgcttgtcaaaattatgaaaagaagctctttcttcac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 ccggttgttcaacataaaggagatgcttgtcaaaattatgaaaagaagctctttcttcac 559
Query: 361 ggttaccaagtactggtttcttccactgaagggatcccattcctagtgctcccatccctt 420
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 tgttaccaaatactggtttcttccactgaagggatcccattcctagtgctcccatccctt 619
Query: 421 cctgtcaacccagtcacatgatctttatctcctccctggcaaaatttctgtaaaagctgt 480
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 620 cctgtcaacccagtcacatgatctttatctcctccctggcaaaatttctgtaaaagctct 679
Query: 481 tcctccaccccatttgtgtgtaacctagag 510
||||||| ||||||||||| ||||||||||
Sbjct: 680 tcctccatcccatttgtgtataacctagag 709
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 510
Length of database: 909
Length adjustment: 10
Effective length of query: 500
Effective length of database: 899
Effective search space: 449500
Effective search space used: 449500
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no059_h13.g1 MSMg01no059_h13.g1 CHROMAT_FILE:
MSMg01no059_h13.g1 PHD_FILE: MSMg01no059_h13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:01:59 2005
(505 letters)
>mm_chr1_73637954_73638859
Length = 906
Score = 917 bits (474), Expect = 0.0
Identities = 498/506 (98%), Gaps = 1/506 (0%)
Strand = Plus / Minus
Query: 1 acccactcccaccctata-tttttttccctctgctgttttttcctctcttccacgggtta 59
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 706 acccactcccaccctatattttttttccctctgctgttttttcctctcttccacgggtta 647
Query: 60 ttttttccaactagggagacaaggggaatatgtatcccaggtaaagtgaggagggaaggg 119
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 646 ttttttccaactagggagacaaggggaatgtgtatcccaggtaaagtgaggagggaaggg 587
Query: 120 gcggggcgatggcacagacacatcaaaagggccctttgtactctgggcacattattcctg 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 586 gcggggcgatggcacagacacatcaaaagggccctttgtactctgggcacattattcctg 527
Query: 180 gaatccaatcaagtgcccaaaaaacctaaccaagcttttcagacagcccagaaaccagtc 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 526 gaatccaatcaagtgcccaaaaaacctaaccaagcttttcagacagcccagaaaccagtc 467
Query: 240 atgcatgtctcttggactctgctttttataaagctttatagggtacactgaattatttgg 299
| ||| | ||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 acgcaggcctcttgggctctgctttttataaagctttatagggtacactgaattatttgg 407
Query: 300 ctgggtcttttcaaccgtgtgacatttgggttttcaatggcacaaatggagctgatcatt 359
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 ttgggtcttttcaaccgtgtgacatttgggttttcaatggcacaaatggagctgatcatt 347
Query: 360 aattatttggacgctttaattaaaaacaacaactcattgtggatttatgagggtctgctg 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 aattatttggacgctttaattaaaaacaacaactcattgtggatttatgagggtctgctg 287
Query: 420 gggggcaaggacagggacccctttagagattctttcatttgaatgagagtgagtgttggg 479
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 286 gggggcaaggacagggacccctttagagattctctcatttgaatgagagtgagtgttggg 227
Query: 480 aaggtctagaaagggaggctgtagaa 505
||||||||||||||||||||||||||
Sbjct: 226 aaggtctagaaagggaggctgtagaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 505
Length of database: 906
Length adjustment: 10
Effective length of query: 495
Effective length of database: 896
Effective search space: 443520
Effective search space used: 443520
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
