Query= MSMg01no059_n14.b1 MSMg01no059_n14.b1 CHROMAT_FILE:
MSMg01no059_n14.b1 PHD_FILE: MSMg01no059_n14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:02:27 2005
(436 letters)
>mm_chr1_161680030_161680866
Length = 837
Score = 822 bits (425), Expect = 0.0
Identities = 434/437 (99%), Gaps = 1/437 (0%)
Strand = Plus / Plus
Query: 1 tcacctgtatgcacccctgccctgggatactctgctcatagccaccaaggaagctttctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcacctgtatgcacccctgccctgggatactctgctcatagccaccaaggaagctttctg 260
Query: 61 aaccccgcgtatgactgcactactttcttagctctctccaatttccttcatatccaatat 120
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaccccgcatatgactgcactactttcttagctctctccaatttccttcatatccaatat 320
Query: 121 ccttgctgttctaacaagtcacacacaacaactggggatcgggcttcttaactttccagc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ccttgctgttctaacaagtcacacacaacaactggggatcgggcttcttaactttccagc 380
Query: 181 ctgatctcctaatagtcacttagtggagtatacactttggctcgcccaatcctgagtagc 240
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 381 ctgatctcctaatagtcacttagtggagtacacactttggctcgcccaatcctgagtagc 440
Query: 241 tgccttctctcacaaaactatgctctatcccctgcaggaactcctgcttgaactgaattc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgccttctctcacaaaactatgctctatcccctgcaggaactcctgcttgaactgaattc 500
Query: 301 tcatctgtaaaggttatctcaaacattgcctccccttctctgactccttctctaccctat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tcatctgtaaaggttatctcaaacattgcctccccttctctgactccttctctaccctat 560
Query: 361 tcttggattgaattaggactttcctccatgattcctgagcacccggg-agcaaaactcca 419
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 561 tcttggattgaattaggactttcctccatgattcctgagcacccggggagcaaaactcca 620
Query: 420 gtattgatctgagcact 436
|||||||||||||||||
Sbjct: 621 gtattgatctgagcact 637
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 436
Length of database: 837
Length adjustment: 9
Effective length of query: 427
Effective length of database: 828
Effective search space: 353556
Effective search space used: 353556
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no059_n14.g1 MSMg01no059_n14.g1 CHROMAT_FILE:
MSMg01no059_n14.g1 PHD_FILE: MSMg01no059_n14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:02:27 2005
(460 letters)
>mm_chr1_161824272_161825131
Length = 860
Score = 866 bits (448), Expect = 0.0
Identities = 457/460 (99%)
Strand = Plus / Minus
Query: 1 ttcgctgaccccgtcaaccaggatggtctctccagcaactgaaatcagatgcacacagat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 858 ttcgctgaccccgtcaaccaggatggtctctccagcaactgaaatcagatgcacacagat 799
Query: 61 gaggaaaatactactacatctaaagcattgcacatgaactccgtaccccagaattctgga 120
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 798 gaggaaaatactactacatctaaagcattccacatgaactccgtaccccagaattctgga 739
Query: 121 aaaactacagatgatgcagctgatggctctacacaaggatcctcttttatctttatcctt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 738 aaaactacagatgatgcagctgatggctctacacaaggatcctcttttatctttatcctt 679
Query: 181 attattattattattattcaggaaaaagtgttctatatatggaggtcaaaagtgcctcta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 678 attattattattattattcaggaaaaagtgttctatatatggaggtcaaaagtgcctcta 619
Query: 241 ccttctacttatgcctctggaagcaaagagtaaaaacggttctcgtttgtctgatttttt 300
||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 ccttctactcaggcctctggaagcaaagagtaaaaacggttctcgtttgtctgatttttt 559
Query: 301 tccttctatccacattcccccatcaattgctccctcctttagcctgagaaaatacagccc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 tccttctatccacattcccccatcaattgctccctcctttagcctgagaaaatacagccc 499
Query: 361 ctgcttctcattacatttataatgacagttctaaagcttctctaattctgactgcttttt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 ctgcttctcattacatttataatgacagttctaaagcttctctaattctgactgcttttt 439
Query: 421 tctggaccaagtttaccaaggcccttgctgaaaggcagaa 460
||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 tctggaccaagtttaccaaggcccttgctgaaaggcagaa 399
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 460
Length of database: 860
Length adjustment: 10
Effective length of query: 450
Effective length of database: 850
Effective search space: 382500
Effective search space used: 382500
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
