Query= MSMg01no060_g14.b1 MSMg01no060_g14.b1 CHROMAT_FILE:
MSMg01no060_g14.b1 PHD_FILE: MSMg01no060_g14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:03:08 2005
(210 letters)
>mm_chr1_34671902_34672510
Length = 609
Score = 383 bits (198), Expect = e-111
Identities = 207/210 (98%), Gaps = 1/210 (0%)
Strand = Plus / Minus
Query: 1 caagtctatgtgtaagccactggaccagggattccctataccttcctatggaatgtttat 60
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 409 caagtctatgtgtaagccactggaccagggattccctataccttccgatggaatgtttat 350
Query: 61 ctcaaggctttgcaaaaaagtctgaggtttaagagccagtcttttgaagcctttttctgg 120
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 349 ctcaaggctttgcaaaaaagtctgaggtttaagacccagtcttttgaagcctttttctgg 290
Query: 121 gagacctagtcttttcccccagatattctaaattctgagacagaaaggaaggtagaccag 180
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 gagacctagtctttt-ccccagatattctaaattctgagacagaaaggaaggtagaccag 231
Query: 181 gtgccgatggtatattccaagagtgaggta 210
||||||||||||||||||||||||||||||
Sbjct: 230 gtgccgatggtatattccaagagtgaggta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 210
Length of database: 609
Length adjustment: 9
Effective length of query: 201
Effective length of database: 600
Effective search space: 120600
Effective search space used: 120600
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no060_g14.g1 MSMg01no060_g14.g1 CHROMAT_FILE:
MSMg01no060_g14.g1 PHD_FILE: MSMg01no060_g14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:03:08 2005
(274 letters)
>mm_chr1_34503291_34503963
Length = 673
Score = 484 bits (250), Expect = e-141
Identities = 268/274 (97%), Gaps = 1/274 (0%)
Strand = Plus / Plus
Query: 1 catttggcatgaaattcccctcgtatgcccataattttggccttttcctaatgccccaaa 60
||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||
Sbjct: 201 catttggcatgaaattcccctcgtatgcccataattttggcctttgcataatgccccaaa 260
Query: 61 ggtcttgcacgttttattcacacacacttacatgcatcattggccttgactgagtgatgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggtcttgcacgttttattcacacacacttacatgcatcattggccttgactgagtgatgc 320
Query: 121 ggttctgccttgctctgaagccccgagctcctctcctgtatgcaatcctctctattccgg 180
||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||
Sbjct: 321 ggttctgccttgctctgaagccccgc-ctcctctcctgtatgcaatcctctctattctgg 379
Query: 181 ggcttcttcccactgagcttctacctgacctgcacttttcgctttctaccctcgtctcag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 380 ggcttcttcccactgagcttctacctgacctgcacttttcgctttctaccctcatctcag 439
Query: 241 ttcaggttttcctctctgtatgtctttatcaaat 274
||||||||||||||||||||||||||||||||||
Sbjct: 440 ttcaggttttcctctctgtatgtctttatcaaat 473
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 274
Length of database: 673
Length adjustment: 9
Effective length of query: 265
Effective length of database: 664
Effective search space: 175960
Effective search space used: 175960
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
