CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCAAGGCCCACACCTAAACATGATAAAAGCAATCTACAGCAAACCAG
TAGCCAACATCAAAGTAAATGGAGAGATGCTGGAAGCAATCCCACTAAAA
TCAGGGACTAGACAAGGCTGCCCACTTTCTCCCTACCTTTTCAACATAGT
ACTTGAAGTATCAGCCAGAGCAATTCAACAACAAAAGGAGATCAAGGGGA
TACAAATTGGAAAAGAGGAAGTCAATATATCACTTTTTGCAGATGATGTG
ATGGTATATATAAGTGAACCTGAAAATTCCACCAGAAAACTTCCAAAACC
TGATAAACAGCTTCAGTGAAGGAGCTGGATATAAAATTAACTCAAACAAG
TCAATGGCCTTTCTCCACCAAAGAATAAACGGGCTGAGAAAGAAATTAGG
GAAACAACACCCTTCTCAATTGTCACAAATAATATAAAATATCTCAGCGT
GACTCTAACTAAGGAAGTGAAAGATCTGTATGATAAAAACTTCAAATCTC
TGTAGAAAGAAATTAAAGAAGATGTCAGAAGATGGAAAGATCTCCCATGC
TAATGGAATGGCAGGATAAATATAGTAAAAATGGCTATCTTGCCAAAAGC
AATCTACAGATTCAATGCAATCCCCATCAAAATTCCAACTCAATTCTTCA
ACGAATTAGAAG

TAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXTCAGAGAAAATGGAAAAATACCAGGATT
TTTTAAAACGTAAGTTCCCAAATTAGTTGAGTTTGAATTAATCAAAATGA
CTCTTTTTCTTGGAGAGCCTGACTTCAATTAAGGAAAAAAATTGCATCAT
CCTTGAGGTCAAAGAGTTAGCCTGCAGGTTTTATGGTTGAGAGGCCACAA
TGGCTTAAAATGAAACCCAGATAAAAGTCTTAACGAGCCAGAGAGAAAGA
ATTCCACTAACAAGTTAGTGATCCTGGAAACTGATTACTCCTGAATCAAA
TAAGTAGATAAGAAAAGAAGTCCAGTCACCAATTTATTTCAATTTATTTC
CAGGACACCCACAATATAAGGAGGTGGGAGAAGTTGTATATTCATGATAA
TTGTAAAATAATAAACATATGTGCCTTACTTCAACATACTAATATTATAT
TGCTTGGAATGGAAGAATCTTTTTTTTTTTTTCATTTTGCTTTTTTGAGT
CAGCGTTTCTCTGGGAAACCGTGGCTGTCTTGTAACTTACCCGTTAGACC
AGTCTGTCGTTGACTTCTAATATCTGTTTGCCTTTGTCTTCCATTTGCTG
GAATTAAAGTTGTGCTCGCACCAAAGCCAGGCATATTTTTCCCTTTCTCG
GAACCN

Query= MSMg01no060_m07.g1 MSMg01no060_m07.g1 CHROMAT_FILE:
MSMg01no060_m07.g1 PHD_FILE: MSMg01no060_m07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:03:34 2005
         (492 letters)



>mm_chr1_106097108_106098001
          Length = 894

 Score =  926 bits (479), Expect = 0.0
 Identities = 489/493 (99%), Gaps = 2/493 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   tcagagaaaatggaaaaataccaggattttttaaaacgtaagttcccaaattagttgagt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcagagaaaatggaaaaataccaggattttttaaaacgtaagttcccaaattagttgagt 260

                                                                       
Query: 61  ttgaattaatcaaaatgactctttttcttggagagcctgacttcaattaaggaaaaaaat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttgaattaatcaaaatgactctttttcttggagagcctgacttcaattaaggaaaaaaat 320

                                                                       
Query: 121 tgcatcatccttgaggtcaaagagttagcctgcaggttttatggttgagaggccacaatg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgcatcatccttgaggtcaaagagttagcctgcaggttttatggttgagaggccacaatg 380

                                                                       
Query: 181 gcttaaaatgaaacccagataaaagtcttaacgagccagagagaaagaattccactaaca 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gcttaaaatgaaacccagataaaagtcttaacgagccagagagaaagaattccactaaca 440

                                                                       
Query: 241 agttagtgatcctggaaactgattactcctgaatcaaataagtagataagaaaagaagtc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agttagtgatcctggaaactgattactcctgaatcaaataagtagataagaaaagaagtc 500

                                                                       
Query: 301 cagtcaccaatttatttcaatttatttccaggacacccacaatataaggaggtgggagaa 360
           ||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||
Sbjct: 501 cagtcaccaatttatttcaatttatttccaggacaccaagaatataaggaggtgggagaa 560

                                                                       
Query: 361 gttgtatattcatgataattgtaaaataataaacatatgtgccttacttcaacatactaa 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gttgtatattcatgataattgtaaaataataaacatatgtgccttacttcaacatactaa 620

                                                                       
Query: 421 tattatattgcttggaatggaagaatcttttttttttttt--cattttgcttttttgagt 478
           ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||
Sbjct: 621 tattatattgcttggaatggaagaatctttttttttttttttcattttgcttttttgagt 680

                        
Query: 479 cagcgtttctctg 491
           |||||||||||||
Sbjct: 681 cagcgtttctctg 693


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 492
Length of database: 894
Length adjustment: 10
Effective length of query: 482
Effective length of database: 884
Effective search space:   426088
Effective search space used:   426088
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)