Query= MSMg01no061_f23.b1 MSMg01no061_f23.b1 CHROMAT_FILE:
MSMg01no061_f23.b1 PHD_FILE: MSMg01no061_f23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:04:19 2005
(430 letters)
>mm_chr1_148342075_148342905
Length = 831
Score = 810 bits (419), Expect = 0.0
Identities = 428/431 (99%), Gaps = 1/431 (0%)
Strand = Plus / Minus
Query: 1 aaatcctgcaggatcttcccactcacagttcttttcagagtttacctgcactgggaatgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 631 aaatcctgcaggatcttcccactcacagttcttttcagagtttacctgcactgggaatgt 572
Query: 61 tatcattaggattaatagtattccatcagtgcatttcactagcacttccttggaatcctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 571 tatcattaggattaatagtattccatcagtgcatttcactagcacttccttggaatcctt 512
Query: 121 tcccttgcagaaactgatccaggcatagtaagaaaatcgacttaacacacagcccaaata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 tcccttgcagaaactgatccaggcatagtaagaaaatcgacttaacacacagcccaaata 452
Query: 181 aaccagcaggaccggtcccattgcattgatctaatcctcagcga-tttttttgcatagac 239
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 451 aaccagcaggaccggtcccattgcattgatctaatcctcagcgattttttttgcatagac 392
Query: 240 aggggctgggaggtgaatggttgaaggtcgtagtcactcagagttttcgagggcgctatg 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 aggggctgggaggtgaatggttgaaggtcgtagtcactcagagttttcgagggcgctatg 332
Query: 300 ctttggagggttagcaagatgaccaagaggctgatgatgggttacctaggcggcagcagc 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 ctttggagggttagcaagatgaccaagaggctgatgatgggttacctaggcggcagcagc 272
Query: 360 cttcctaggtcccacttcctcgctaaatcatgcagcctgcgtttaaggcaattgctttca 419
|||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||
Sbjct: 271 cttcctaggtcccacttcctcgttaaatcatgcagcctgtgtttaaggcaattgctttca 212
Query: 420 gtactgagccc 430
|||||||||||
Sbjct: 211 gtactgagccc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 430
Length of database: 831
Length adjustment: 9
Effective length of query: 421
Effective length of database: 822
Effective search space: 346062
Effective search space used: 346062
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no061_f23.g1 MSMg01no061_f23.g1 CHROMAT_FILE:
MSMg01no061_f23.g1 PHD_FILE: MSMg01no061_f23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:04:19 2005
(664 letters)
>mm_chr1_148156755_148157818
Length = 1064
Score = 1261 bits (652), Expect = 0.0
Identities = 661/664 (99%)
Strand = Plus / Plus
Query: 1 attcactctatgagtcacctatatttgctattcttcagtatcaggttcatgtgtcattac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attcactctatgagtcacctatatttgctattcttcagtatcaggttcatgtgtcattac 260
Query: 61 ttctggcaaagcaagctgaacttaagctgtacaaataatatattttacttgagactctga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttctggcaaagcaagctgaacttaagctgtacaaataatatattttacttgagactctga 320
Query: 121 aaggtctcagtatatttctaagaactagtaggttttaatgtatcttgtgttcaactaaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaggtctcagtatatttctaagaactagtaggttttaatgtatcttgtgttcaactaaag 380
Query: 181 gggatattagtttcatctacatattccatgtgcaaacatgtcctgaaagtttccatcttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gggatattagtttcatctacatattccatgtgcaaacatgtcctgaaagtttccatcttt 440
Query: 241 taaatattggcacagagaaaacctacacaacaaataaatccttattagcatgtaaatcat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 taaatattggcacagagaaaacctacacaacaaataaatccttattagcatgtaaatcat 500
Query: 301 tctagtttttccatttatagtatttctgatacatgaatactgttttgaagaattgttttg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tctagtttttccatttatagtatttctgatacatgaatactgttttgaagaattgttttg 560
Query: 361 cttcttaatttttccaaacgtttgaaggcataagtagagtgtgagggattttaatgaaaa 420
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cttcttaatttttccaaaagtttgaaggcataagtagagtgtgagggattttaatgaaaa 620
Query: 421 gcattacccaatgcttagtatattaaaaaagcatatttacttcggctggatttattgttc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gcattacccaatgcttagtatattaaaaaagcatatttacttcggctggatttattgttc 680
Query: 481 attagaggctaagtgaatgtaggttagattattcaggaactgaataagactatacaggtt 540
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 attagaggctcagtgaatgtaggttagattattcaggaactgaataagactatacaggtt 740
Query: 541 ggttggctctaatgagtgctctatgtccatgggatggacaggatacatttcacttaactg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 741 ggttggctctaatgagtgctctatgtccatgggatggacaggatacatttcacttaattg 800
Query: 601 tcttattttctcattgagtcagattcatatacagttcatattcattttttttctgaggaa 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 tcttattttctcattgagtcagattcatatacagttcatattcattttttttctgaggaa 860
Query: 661 atct 664
||||
Sbjct: 861 atct 864
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 664
Length of database: 1064
Length adjustment: 10
Effective length of query: 654
Effective length of database: 1054
Effective search space: 689316
Effective search space used: 689316
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
