Query= MSMg01no063_i18.b1 MSMg01no063_i18.b1 CHROMAT_FILE:
MSMg01no063_i18.b1 PHD_FILE: MSMg01no063_i18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:07:57 2005
(318 letters)
>mm_chr1_125294920_125295638
Length = 719
Score = 545 bits (282), Expect = e-159
Identities = 306/314 (97%), Gaps = 3/314 (0%)
Strand = Plus / Plus
Query: 5 ggaattctcctcttcc-ccttgttta-caggaacagtcatgaagaacttgcttccatctc 62
|||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 205 ggaattctcctcttccaccttgtttaacaggaacagtcatgaagaacttgcttccatctc 264
Query: 63 tggaaaacactggctcctcgttctagaatggagaagggcacagaagaatctcagaatgtc 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tggaaaacactggctcctcgttctagaatggagaagggcacagaagaatctcagaatgtc 324
Query: 123 tatggggtcagctttctaagcaacatcaaacataggctgttatttgatttgaattagttt 182
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 325 tatggggtcagctttctaagcaacatcaaacataggctgttctttgatttgaattagttt 384
Query: 183 gggaaatagaaaaattgttgtttttaattaaagaaaaaaagcatggcatttagaatatta 242
|||||||||||||||||||||||||||||||||||| ||||||| ||||||||||| |||
Sbjct: 385 gggaaatagaaaaattgttgtttttaattaaagaaacaaagcatagcatttagaatttta 444
Query: 243 atacatagatttaatgtcagagtatgtgtatgaatatcaaaagtgaaaaaaatgttgagg 302
||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct: 445 atacatagatttaatgtcagagtatgtgtatgaatatcaaaagtggaaaaa-tgttgagg 503
Query: 303 tatcatgcattggg 316
||||||||||||||
Sbjct: 504 tatcatgcattggg 517
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 318
Length of database: 719
Length adjustment: 9
Effective length of query: 309
Effective length of database: 710
Effective search space: 219390
Effective search space used: 219390
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no063_i18.g1 MSMg01no063_i18.g1 CHROMAT_FILE:
MSMg01no063_i18.g1 PHD_FILE: MSMg01no063_i18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:07:57 2005
(298 letters)
>mm_chr1_125432535_125433232
Length = 698
Score = 350 bits (181), Expect = e-101
Identities = 193/199 (96%), Gaps = 6/199 (3%)
Strand = Plus / Minus
Query: 100 agagacagagagacagagagacagagagagacagagagagagttataaactgtaagaaag 159
|||||||||||| |||||| |||||||| ||||||||||||||||||||||||||||
Sbjct: 534 agagacagagag--agagag--agagagag--agagagagagttataaactgtaagaaag 481
Query: 160 gaataacattttgctgtaggtctttgtctctgtcccttatcattcagtaataaccagacc 219
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 gaataacattttgctgtaggtctttgtctctgtcccttatcattcagtaataaccagacc 421
Query: 220 aaggactgtttagaaaaggaaaatgaatgaaaccacaggttcattacacataaagcaaag 279
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 aaggactgtttagaaaaggaaaatgaatgaaaccacaggttcattacacataaagcaaag 361
Query: 280 aataaatggatttcctcaa 298
|||||||||||||||||||
Sbjct: 360 aataaatggatttcctcaa 342
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 298
Length of database: 698
Length adjustment: 9
Effective length of query: 289
Effective length of database: 689
Effective search space: 199121
Effective search space used: 199121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
