Query= MSMg01no064_c06.b1 MSMg01no064_c06.b1 CHROMAT_FILE:
MSMg01no064_c06.b1 PHD_FILE: MSMg01no064_c06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:08:50 2005
(423 letters)
>mm_chr1_175348519_175349342
Length = 824
Score = 783 bits (405), Expect = 0.0
Identities = 408/409 (99%), Gaps = 1/409 (0%)
Strand = Plus / Plus
Query: 16 gaattcca-cgagaagaaccaatacctacagttagaaaaaaacagcattaaacgggatgc 74
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 216 gaattccaacgagaagaaccaatacctacagttagaaaaaaacagcattaaacgggatgc 275
Query: 75 ttacgatactcagcaaaaaccaaaccaggaagttaaggcagttaagtttctctccatggc 134
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 ttacgatactcagcaaaaaccaaaccaggaagttaaggcagttaagtttctctccatggc 335
Query: 135 tgaccttcacactgtagacctgtatacatcacagttaaaacatgttggaaatgattgacc 194
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 tgaccttcacactgtagacctgtatacatcacagttaaaacatgttggaaatgattgacc 395
Query: 195 tagtttttaagaaggtcatatttttattcttgagctgttttgtcctccttgtaacagaga 254
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 tagtttttaagaaggtcatatttttattcttgagctgttttgtcctccttgtaacagaga 455
Query: 255 tggaaaaccagacatccccagacaagaagccctggaggacactgtaagacaaatattctc 314
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 tggaaaaccagacatccccagacaagaagccctggaggacactgtaagacaaatattctc 515
Query: 315 tgaagtagcaggaggatagaaccagcctctccctgagcaaacaatgcataccaatttaca 374
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 tgaagtagcaggaggatagaaccagcctctccctgagcaaacaatgcataccaatttaca 575
Query: 375 agtgtaaagtgcactacagtcactagggcaaggttgggtaatggaagct 423
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 agtgtaaagtgcactacagtcactagggcaaggttgggtaatggaagct 624
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 423
Length of database: 824
Length adjustment: 9
Effective length of query: 414
Effective length of database: 815
Effective search space: 337410
Effective search space used: 337410
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no064_c06.g1 MSMg01no064_c06.g1 CHROMAT_FILE:
MSMg01no064_c06.g1 PHD_FILE: MSMg01no064_c06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:08:50 2005
(385 letters)
>mm_chr1_175591277_175592061
Length = 785
Score = 497 bits (257), Expect = e-145
Identities = 344/385 (89%), Gaps = 20/385 (5%)
Strand = Plus / Plus
Query: 1 attggcaaaagaaaacattttctgaatagaatagcattagcacaaacagtaagatcaaca 60
||||||| ||||||||| ||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 221 attggcacaagaaaacactttctgaataggatagcattagcacaaacagtaagatcaaca 280
Query: 61 attaaattgaatttctcaactgatatagggctaaaacccaaaatacataaggagctcaag 120
||||||| ||||||||||||||||| |||||||| |||| || || ||||||| ||||||
Sbjct: 281 attaaatggaatttctcaactgatagagggctaataccc-aagtatataaggaactcaag 339
Query: 121 aaactagaccaaaaaaaaaaaacaaaaacaaaaaacaaattagcccaatttaaactggag 180
|| |||||||||||||||||| |||||||||||||||||| |
Sbjct: 340 aagctagaccaaaaaaaaaaa-------------------tagcccaatttaaactgggg 380
Query: 181 cacagagctaaacagagaattctcaataaagtaaactcaaatggctgagataacacagaa 240
||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 381 cacagtgctaaacagagaattctcaataaactaaactcaaatggctgagataacacagaa 440
Query: 241 aggtgagccatcagggaaatgcagtatcagagtagttttaatatctattatgctgatggc 300
|||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 441 aggtaagccatcagggaaatgcagtatcatagtagttttaatatctattatgctgatggc 500
Query: 301 ctgtcatgtttcaccaacatctgtgtttcattatttgacagtcttttgtttgcttttatg 360
||||||||||| ||||||||||||||||||||||||| |||| |||||||||||||||
Sbjct: 501 ttgtcatgtttctccaacatctgtgtttcattatttgagagtcctttgtttgcttttata 560
Query: 361 tcccattttaatagaactatttgtt 385
||||||||||||| |||||||||||
Sbjct: 561 tcccattttaatataactatttgtt 585
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 385
Length of database: 785
Length adjustment: 9
Effective length of query: 376
Effective length of database: 776
Effective search space: 291776
Effective search space used: 291776
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
