Query= MSMg01no065_i02.b1 MSMg01no065_i02.b1 CHROMAT_FILE:
MSMg01no065_i02.b1 PHD_FILE: MSMg01no065_i02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:11:02 2005
(337 letters)
>mm_chr1_67896130_67896867
Length = 738
Score = 646 bits (334), Expect = 0.0
Identities = 337/338 (99%), Gaps = 1/338 (0%)
Strand = Plus / Minus
Query: 1 gctctgtcc-aaatttccaaaacctgttacattaaagcttagggttatatgagatcaata 59
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 gctctgtccaaaatttccaaaacctgttacattaaagcttagggttatatgagatcaata 479
Query: 60 aatctcttaagattccacaaagcatgtggatctatcttctttgggctaacgataatccca 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 aatctcttaagattccacaaagcatgtggatctatcttctttgggctaacgataatccca 419
Query: 120 aacgttttggcctttaaggggtggtaggaaggttctgttatcagaaattttaactagaca 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 aacgttttggcctttaaggggtggtaggaaggttctgttatcagaaattttaactagaca 359
Query: 180 acctttaaattccattccatttaaacctgagttgtgctgcaaaaaaatttaagaccctgg 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 acctttaaattccattccatttaaacctgagttgtgctgcaaaaaaatttaagaccctgg 299
Query: 240 acagcaatcaatcaaattggccaatatccactgtacttcccttagtttttttccccccca 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 acagcaatcaatcaaattggccaatatccactgtacttcccttagtttttttccccccca 239
Query: 300 ctaaactctccttcacatatttactgatgggcagagat 337
||||||||||||||||||||||||||||||||||||||
Sbjct: 238 ctaaactctccttcacatatttactgatgggcagagat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 337
Length of database: 738
Length adjustment: 9
Effective length of query: 328
Effective length of database: 729
Effective search space: 239112
Effective search space used: 239112
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no065_i02.g1 MSMg01no065_i02.g1 CHROMAT_FILE:
MSMg01no065_i02.g1 PHD_FILE: MSMg01no065_i02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:11:02 2005
(466 letters)
>mm_chr1_67739778_67740643
Length = 866
Score = 901 bits (466), Expect = 0.0
Identities = 466/466 (100%)
Strand = Plus / Plus
Query: 1 ttactcctctctttcctcctcaatttacaaagttattcgagacttctttgaagtctgact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttactcctctctttcctcctcaatttacaaagttattcgagacttctttgaagtctgact 260
Query: 61 attcatcataaattcacatatatacatacacacatatgcacacacatatatacatatata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 attcatcataaattcacatatatacatacacacatatgcacacacatatatacatatata 320
Query: 121 tgtttatattacctatatatcacacacatactatgtgtgtgtgtattacacacatacata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgtttatattacctatatatcacacacatactatgtgtgtgtgtattacacacatacata 380
Query: 181 tatatttattggtgatatatatatatatatatgaaaaacctagagaaatgttgacattgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tatatttattggtgatatatatatatatatatgaaaaacctagagaaatgttgacattgt 440
Query: 241 ataaagatagctttctaattatgaatcatacttgtcaatgaaagagtatttatattccaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ataaagatagctttctaattatgaatcatacttgtcaatgaaagagtatttatattccaa 500
Query: 301 ataaaagattgtggctccttatgatcctttaatattaacatatgtaataaaggctttatt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ataaaagattgtggctccttatgatcctttaatattaacatatgtaataaaggctttatt 560
Query: 361 cattatctaataaagtgaagattattccttacctaaagaggtaatatgcaaaactgcacc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cattatctaataaagtgaagattattccttacctaaagaggtaatatgcaaaactgcacc 620
Query: 421 ttgtacatatgatttttttcctgatagtatcaacctgaaagcagca 466
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ttgtacatatgatttttttcctgatagtatcaacctgaaagcagca 666
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 40
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 466
Length of database: 866
Length adjustment: 10
Effective length of query: 456
Effective length of database: 856
Effective search space: 390336
Effective search space used: 390336
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
