Query= MSMg01no065_m20.b1 MSMg01no065_m20.b1 CHROMAT_FILE:
MSMg01no065_m20.b1 PHD_FILE: MSMg01no065_m20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:11:24 2005
(354 letters)
>mm_chr1_42851444_42852197
Length = 754
Score = 661 bits (342), Expect = 0.0
Identities = 351/354 (99%)
Strand = Plus / Minus
Query: 1 acgcagacatacatgtatgcaaaataccaatgcacatgaaataaaaataagtcattaaaa 60
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 629 acgcagacatacatgtatgcaaaataccaatgcacatgaaataaaaataaatcattaaaa 570
Query: 61 tattaaaaaaataaaccttattacaaaaggtaaatataataaagaccaacaccaggtata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 tattaaaaaaataaaccttattacaaaaggtaaatataataaagaccaacaccaggtata 510
Query: 121 gtacagtaataatcatgcataaaccacttcatataatataaaatctcaaaaactaaagat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 gtacagtaataatcatgcataaaccacttcatataatataaaatctcaaaaactaaagat 450
Query: 181 ggaaaaactgtaaaactatgttaatagatacaagcacctctgattataatttatcacctc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 ggaaaaactgtaaaactatgttaatagatacaagcacctctgattataatttatcacctc 390
Query: 241 actaatacttattctatatgggagggatgtaaaagaattgagtatttaatcaaagttatc 300
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 actaatacaaattctatatgggagggatgtaaaagaattgagtatttaatcaaagttatc 330
Query: 301 agcttaaaatgggttgttacaaagtattttataatagcctcgtggcaactttaa 354
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 agcttaaaatgggttgttacaaagtattttataatagcctcgtggcaactttaa 276
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 354
Length of database: 754
Length adjustment: 9
Effective length of query: 345
Effective length of database: 745
Effective search space: 257025
Effective search space used: 257025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no065_m20.g1 MSMg01no065_m20.g1 CHROMAT_FILE:
MSMg01no065_m20.g1 PHD_FILE: MSMg01no065_m20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:11:24 2005
(193 letters)
>mm_chr1_42724968_42725557
Length = 590
Score = 335 bits (173), Expect = 1e-96
Identities = 187/193 (96%), Gaps = 3/193 (1%)
Strand = Plus / Plus
Query: 1 tggttcacctggagcatatattcagtggtggtttgcagagcctgagttataaacacaacg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tggttcacctggagcatatattcagtggtggtttgcagagcctgagttataaacacaacg 260
Query: 61 tacacacagcagctactcctatctgtgtcttccagcttcaggcatgtttgattttaaaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 261 tacacacagcagctactcctatctgtgtcttccagcttcaggcatgtttgatt---aaaa 317
Query: 121 aaaaacggctgtggtattattatcttataacaagatcctgtgattcatcctatgacataa 180
||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||| ||
Sbjct: 318 aaaaatggctgtggtattattatcttataacaagatcctatgattcatcctatgacagaa 377
Query: 181 taccaaaggtaaa 193
|||||||||||||
Sbjct: 378 taccaaaggtaaa 390
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 193
Length of database: 590
Length adjustment: 8
Effective length of query: 185
Effective length of database: 582
Effective search space: 107670
Effective search space used: 107670
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
