Query= MSMg01no065_n02.b1 MSMg01no065_n02.b1 CHROMAT_FILE:
MSMg01no065_n02.b1 PHD_FILE: MSMg01no065_n02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:11:25 2005
(475 letters)
>mm_chr1_107620840_107621714
Length = 875
Score = 756 bits (391), Expect = 0.0
Identities = 439/475 (92%), Gaps = 31/475 (6%)
Strand = Plus / Plus
Query: 1 tgatgttacccacgtgagttcacatagcagccatgactgtgctcttcacttaatatattg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgatgttacccacgtgagttcacatagcagccatgactgtgctcttcacttaatatattg 260
Query: 61 ttgaatgcctattgcagcacaagagtttgatagtcttatatttagcttggagcttttttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttgaatgcctattgcagcacaagagtttgatagtcttatatttagcttggagcttttttt 320
Query: 121 tttccctgaaattaaatgagcatttattaggatggggcagggcatgtctgcagagggcag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tttccctgaaattaaatgagcatttattaggatggggcagggcatgtctgcagagggcag 380
Query: 181 tggtccacagaacaagggtttaaattgtccctattattcaattaatagtcatgtaaatat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tggtccacagaacaagggtttaaattgtccctattattcaattaatagtcatgtaaatat 440
Query: 241 tccataatactatggtatatatacatatatatatatgtgtgtgtgtgtgtatattatata 300
|||||||||||||||||| ||||||||||||||
Sbjct: 441 tccataatactatggtatgtatacatatatata--------------------------- 473
Query: 301 tacactatcaagatggctcagtgggtaaaggttcttgccatcaagcttgatgacctgagg 360
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 474 ----ctatcaagatggctcagtgggtaaaggttcttgccatcaagcttgatggcctgagg 529
Query: 361 ttactctctagtacccatgtgatagaaagagaaaatctgcttttatgaactgtcctctga 420
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 530 ttactctctagtacccatgtgatagaaagagaaaacctgcttttatgaactgtcctctga 589
Query: 421 ccactatgcatactgtaccacatgtgtaccacccacccaccccaccccctgccaa 475
|||||||||||| |||| |||||||||||||||||||||||||||||||||||||
Sbjct: 590 ccactatgcatattgtagcacatgtgtaccacccacccaccccaccccctgccaa 644
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 475
Length of database: 875
Length adjustment: 10
Effective length of query: 465
Effective length of database: 865
Effective search space: 402225
Effective search space used: 402225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no065_n02.g1 MSMg01no065_n02.g1 CHROMAT_FILE:
MSMg01no065_n02.g1 PHD_FILE: MSMg01no065_n02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:11:26 2005
(427 letters)
>mm_chr1_107788478_107789304
Length = 827
Score = 816 bits (422), Expect = 0.0
Identities = 425/426 (99%)
Strand = Plus / Minus
Query: 1 cattatcttaaaattgctggtaattcttccccctgagatgaagttttgataaaggcaaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 cattatcttaaaattgctggtaattcttccccctgagatgaagttttgataaaggcaaca 567
Query: 61 agcaaagaaaagaagctgagggcctgcgatttcaatggcaaagaagagaataggacacag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 agcaaagaaaagaagctgagggcctgcgatttcaatggcaaagaagagaataggacacag 507
Query: 121 ggaaaccgaaggcccctgaggtcagagtgtcctgtttcacagtgttcctgggaaggacca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 ggaaaccgaaggcccctgaggtcagagtgtcctgtttcacagtgttcctgggaaggacca 447
Query: 181 gagacagcagctgccttggaaggactgaaggacgctgccagtttgaggatgcagccctgt 240
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 gagacggcagctgccttggaaggactgaaggacgctgccagtttgaggatgcagccctgt 387
Query: 241 gggacactttgtcatttttaaaccgtatctttgtgatcacttagcaggtacactgggaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 gggacactttgtcatttttaaaccgtatctttgtgatcacttagcaggtacactgggaaa 327
Query: 301 cagcacagagcctggatctcttctccatcactcataaaccagcattttgctttgattttg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 cagcacagagcctggatctcttctccatcactcataaaccagcattttgctttgattttg 267
Query: 361 aacagaatgtgtgataattatgtcggtatctctaagaacatcccacaaacccttttgaat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 aacagaatgtgtgataattatgtcggtatctctaagaacatcccacaaacccttttgaat 207
Query: 421 gtcagc 426
||||||
Sbjct: 206 gtcagc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 427
Length of database: 827
Length adjustment: 9
Effective length of query: 418
Effective length of database: 818
Effective search space: 341924
Effective search space used: 341924
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
