Query= MSMg01no066_a19.b1 MSMg01no066_a19.b1 CHROMAT_FILE:
MSMg01no066_a19.b1 PHD_FILE: MSMg01no066_a19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:11:43 2005
(230 letters)
>mm_chr1_155996991_155997621
Length = 631
Score = 424 bits (219), Expect = e-123
Identities = 228/231 (98%), Gaps = 1/231 (0%)
Strand = Plus / Plus
Query: 1 aaaagagggaatgtctctgttcccacagacaagataaggtggcaaagagtgtcaggtgtc 60
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 201 aaaagagggaatgtctctgttcccacagacaagacaaggtggcaaagagtgtcaggtgtc 260
Query: 61 agggcacccctccccc-ttacacacacacacttctgacagctctggtgttcacctgtagg 119
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agggcacccctcccccaatacacacacacacttctgacagctctggtgttcacctgtagg 320
Query: 120 ctaatctctgcccacaggcctggaccaggcttgacaacagctcctccctcagaccgcccc 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctaatctctgcccacaggcctggaccaggcttgacaacagctcctccctcagaccgcccc 380
Query: 180 agccctgctgggtggcggttgatgattccctggctgtttgttctgctagag 230
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agccctgctgggtggcggttgatgattccctggctgtttgttctgctagag 431
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 230
Length of database: 631
Length adjustment: 9
Effective length of query: 221
Effective length of database: 622
Effective search space: 137462
Effective search space used: 137462
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no066_a19.g1 MSMg01no066_a19.g1 CHROMAT_FILE:
MSMg01no066_a19.g1 PHD_FILE: MSMg01no066_a19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:11:43 2005
(248 letters)
>mm_chr1_156118312_156118959
Length = 648
Score = 480 bits (248), Expect = e-140
Identities = 248/248 (100%)
Strand = Plus / Minus
Query: 1 ttaaaattcacttggaagcatcaaagagcttagtgaaccaaagcaatgctgaaaggaaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 ttaaaattcacttggaagcatcaaagagcttagtgaaccaaagcaatgctgaaaggaaaa 389
Query: 61 caggtgtgggtagggctggggctgggggtggggctttgggaggctggaggtctcataata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 caggtgtgggtagggctggggctgggggtggggctttgggaggctggaggtctcataata 329
Query: 121 cctgattttcagttataacacagagtcacagtacacaagaaatgtgtcagtggcaccaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 cctgattttcagttataacacagagtcacagtacacaagaaatgtgtcagtggcaccaga 269
Query: 181 taagaagtacagagcagtgggtccacataaaaataccacacaggtacagtcacacaactg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 taagaagtacagagcagtgggtccacataaaaataccacacaggtacagtcacacaactg 209
Query: 241 tcacacag 248
||||||||
Sbjct: 208 tcacacag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 248
Length of database: 648
Length adjustment: 9
Effective length of query: 239
Effective length of database: 639
Effective search space: 152721
Effective search space used: 152721
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
