Query= MSMg01no066_f18.b1 MSMg01no066_f18.b1 CHROMAT_FILE:
MSMg01no066_f18.b1 PHD_FILE: MSMg01no066_f18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:12:08 2005
(377 letters)
>mm_chr1_139337138_139337910
Length = 773
Score = 710 bits (367), Expect = 0.0
Identities = 373/377 (98%), Gaps = 4/377 (1%)
Strand = Plus / Minus
Query: 1 atttcccacaacaaaggatactccactcatctgagaataactctactggcccattcaggg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 573 atttcccacaacaaaggatactccactcatctgagaataactctactggcccattcaggg 514
Query: 61 ggtagagtctcatgacatctcatctcttacctactaatagaaagtcataggtaatcaggt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 ggtagagtctcatgacatctcatctcttacctactaatagaaagtcataggtaatcaggt 454
Query: 121 tttattgtgagttttgaagtgcataaacatttttgaagaaggctatagacagcagcagct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 tttattgtgagttttgaagtgcataaacatttttgaagaaggctatagacagcagcagct 394
Query: 181 gtggaagttatataaaagtaagacctttctgacctctaagtcattcataatcatatacag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 gtggaagttatataaaagtaagacctttctgacctctaagtcattcataatcatatacag 334
Query: 241 gtccaatcttgtcctgtgtctcacagcttttgtgggcatgagattctggctctgcacatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 gtccaatcttgtcctgtgtctcacagcttttgtgggcatgagattctggctctgcacatt 274
Query: 301 catctaggatttctgtgttcttgatactactcagacttacttcagaactggagggtagta 360
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 273 catctaggatttctgtgttcttgatactactcag----acttcagaactggagggtagta 218
Query: 361 atcaggaactcttctca 377
|||||||||||||||||
Sbjct: 217 atcaggaactcttctca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 377
Length of database: 773
Length adjustment: 9
Effective length of query: 368
Effective length of database: 764
Effective search space: 281152
Effective search space used: 281152
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no066_f18.g1 MSMg01no066_f18.g1 CHROMAT_FILE:
MSMg01no066_f18.g1 PHD_FILE: MSMg01no066_f18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:12:08 2005
(175 letters)
>mm_chr1_139194815_139195389
Length = 575
Score = 286 bits (148), Expect = 4e-82
Identities = 166/172 (96%)
Strand = Plus / Plus
Query: 1 gctggctggcctttctccatctacactcctgtacctgtaggcttctactcatttggtggg 60
|||||||||||||||||||||||||||||| || |||||||||||||| ||||||||||
Sbjct: 201 gctggctggcctttctccatctacactcctatatgtgtaggcttctacttatttggtggg 260
Query: 61 agtgtgcaggcaggaagtcctggcccattcattcgggcccaactgctacttactcaggat 120
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 261 agtgtgcaggcaggaagtcctggcccattcattcgggcccaactgctgcttactcaggat 320
Query: 121 tactacataaatgctattgtggctttgggaagatatcatgtttgcacacagg 172
||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 321 tactacataaatgctattgtggctttgggaagacatcatgtttgcacacagg 372
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 175
Length of database: 575
Length adjustment: 8
Effective length of query: 167
Effective length of database: 567
Effective search space: 94689
Effective search space used: 94689
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
