Query= MSMg01no067_a10.b1 MSMg01no067_a10.b1 CHROMAT_FILE:
MSMg01no067_a10.b1 PHD_FILE: MSMg01no067_a10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:13:01 2005
(312 letters)
>mm_chr1_78268777_78269489
Length = 713
Score = 571 bits (295), Expect = e-167
Identities = 304/307 (99%), Gaps = 1/307 (0%)
Strand = Plus / Plus
Query: 7 gaattcaattatcttcttaaatggaaaaataaaatattcctggagtcaattagagctgga 66
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 gaattcaattatctttttaaatggaaaaataaaatattcctggagtcaattagagctgga 266
Query: 67 cccagtcctggctctggtaattgaatatgggaaattatttggggatgaagtttatgttgc 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 cccagtcctggctctggtaattgaatatgggaaattatttggggatgaagtttatgttgc 326
Query: 127 tgaagagacaaaatacatgatacaggcttatttcttcaaaatggaattccctcaaaggta 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 tgaagagacaaaatacatgatacaggcttatttcttcaaaatggaattccctcaaaggta 386
Query: 187 attcaaggacgtgcaacatttttcagtcttgatatggcaggtccttctgaggacaggaaa 246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 attcaaggacgtgcaacatttttcagtcttgatatggcaggtccttctgaggacaggaaa 446
Query: 247 tgataacaaatgatctttgaataatatattttttt-ctaatgaatgcacagaaaagaatc 305
||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 447 tgataacaagtgatctttgaataatatattttttttctaatgaatgcacagaaaagaatc 506
Query: 306 attttag 312
|||||||
Sbjct: 507 attttag 513
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 312
Length of database: 713
Length adjustment: 9
Effective length of query: 303
Effective length of database: 704
Effective search space: 213312
Effective search space used: 213312
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no067_a10.g1 MSMg01no067_a10.g1 CHROMAT_FILE:
MSMg01no067_a10.g1 PHD_FILE: MSMg01no067_a10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:13:01 2005
(144 letters)
>mm_chr1_78428876_78429419
Length = 544
Score = 240 bits (124), Expect = 3e-68
Identities = 139/144 (96%)
Strand = Plus / Minus
Query: 1 atgattttgttaaatctctttgttgtaagtgtgcgtcctgtctcggccagagttttattg 60
||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||
Sbjct: 344 atgattttgttaaatctctttgttgtaagtgtgtgtcctgtctaggccagagttttattg 285
Query: 61 ggaaaagaagatatgtggatgtgtaaagaaagaccttgcgaatgggcaagtctctcttca 120
||||||||||||||||||||||||||||||||| |||| ||||||||||||| |||||||
Sbjct: 284 ggaaaagaagatatgtggatgtgtaaagaaagatcttgtgaatgggcaagtcactcttca 225
Query: 121 gagattttcagtctgccaccagga 144
||||||||||||||||||||||||
Sbjct: 224 gagattttcagtctgccaccagga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 144
Length of database: 544
Length adjustment: 8
Effective length of query: 136
Effective length of database: 536
Effective search space: 72896
Effective search space used: 72896
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
