Query= MSMg01no067_g24.b1 MSMg01no067_g24.b1 CHROMAT_FILE:
MSMg01no067_g24.b1 PHD_FILE: MSMg01no067_g24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:13:32 2005
(324 letters)
>mm_chr1_10441983_10442707
Length = 725
Score = 569 bits (294), Expect = e-166
Identities = 309/314 (98%), Gaps = 1/314 (0%)
Strand = Plus / Plus
Query: 12 gaattcatttaacactttctaaaag-aataaagtaatccaggcctatcttatcagtcatg 70
|||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||
Sbjct: 212 gaattcatttaacactttttaaaagcaataaagtaatccaggcctatcttatcagtcatg 271
Query: 71 caaacccatttatttgcacgtattcaactgttttttgggttgcacgttttcagaacaaat 130
|||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 caaacccatttatttgtatgtattcaactgttttttgggttgcacgttttcagaacaaat 331
Query: 131 atccataggtccatctgttagattggagtgggaacagaggaagaagtagctctcagggca 190
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 atccataggtccatctgttagattggagtgggaacagaggaagaagtagctctcagggca 391
Query: 191 tggcatgggacagtcaagctgcttgaagaagaaacaaacagatggagtcacaccatgcct 250
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 392 tggcatgggacagtcaagctgcttgaagaagaaacaaacagatggagtcacatcatgcct 451
Query: 251 tgaaaattctgtttccatggcagagaagcttggaatctgttgataagggctatacataca 310
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 tgaaaattctgtttccatggcagagaagcttggaatctgttgataagggctatacataca 511
Query: 311 gtgagagtaaaact 324
||||||||||||||
Sbjct: 512 gtgagagtaaaact 525
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 324
Length of database: 725
Length adjustment: 9
Effective length of query: 315
Effective length of database: 716
Effective search space: 225540
Effective search space used: 225540
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no067_g24.g1 MSMg01no067_g24.g1 CHROMAT_FILE:
MSMg01no067_g24.g1 PHD_FILE: MSMg01no067_g24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:13:32 2005
(244 letters)
>mm_chr1_10582717_10583360
Length = 644
Score = 406 bits (210), Expect = e-118
Identities = 234/242 (96%)
Strand = Plus / Minus
Query: 3 tctcaaaggaaacttatgtgggacagttatagtaaatcattcctaccaactgcattcatt 62
|||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||
Sbjct: 444 tctcaaaggaaacttatgtgggacagttatagtaaaacattcctaaaaactgcattcatt 385
Query: 63 tagtctttaaggaaagaggtcagcttgggaggtgtcttgttgcaacaggagcttagaaga 122
||||||||||||||||||||||||||||||| ||||||||||| || |||||||||||||
Sbjct: 384 tagtctttaaggaaagaggtcagcttgggagatgtcttgttgctacgggagcttagaaga 325
Query: 123 caattaaaagactggtggaagagcagcatcaagcaatggtctcgaggactctgattttca 182
|||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 324 caattaaaagacaggtggaagagcagcatcaagcaatggtctcggggactctgattttca 265
Query: 183 tgaggcctcatgtgactcattgtgaaagcatgctcacaactgtgatgtatactgtgaaaa 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tgaggcctcatgtgactcattgtgaaagcatgctcacaactgtgatgtatactgtgaaaa 205
Query: 243 gc 244
||
Sbjct: 204 gc 203
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 644
Length adjustment: 9
Effective length of query: 235
Effective length of database: 635
Effective search space: 149225
Effective search space used: 149225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
