Query= MSMg01no068_d11.b1 MSMg01no068_d11.b1 CHROMAT_FILE:
MSMg01no068_d11.b1 PHD_FILE: MSMg01no068_d11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:14:34 2005
(296 letters)
>mm_chr1_70482599_70483294
Length = 696
Score = 524 bits (271), Expect = e-153
Identities = 289/295 (97%)
Strand = Plus / Plus
Query: 1 ggaattcctattctaattccgtaattaattaaagaatagaaagaaacctctagttatatg 60
|||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ggaattcctattctaaagcagtaattaattaaagaatagaaagaaacctctagttatatg 260
Query: 61 ttttaaaatggaagccaagcatttcagatcaatgaagagataatgtgctatccagatgtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttttaaaatggaagccaagcatttcagatcaatgaagagataatgtgctatccagatgtg 320
Query: 121 gggatctaaggcaaaatccaaatgtgcacaaatctgccccattctgagcctgagtaaaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gggatctaaggcaaaatccaaatgtgcacaaatctgccccattctgagcctgagtaaaaa 380
Query: 181 taaaaaacacatagagacaaggaaggaggaggaaggaggaggaaaagttttcttacaact 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 taaaaaacacatagagacaaggaaggaggaggaaggaggaggaaaagttttcttacaact 440
Query: 241 tgaatattatatatatatatatatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg 295
|||||||||||||||||||| | |||| |||||||||||||||||||||||||||
Sbjct: 441 tgaatattatatatatatatgtgtgtgcgtgtgtgtgtgtgtgtgtgtgtgtgtg 495
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 1
Length of query: 296
Length of database: 696
Length adjustment: 9
Effective length of query: 287
Effective length of database: 687
Effective search space: 197169
Effective search space used: 197169
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no068_d11.g1 MSMg01no068_d11.g1 CHROMAT_FILE:
MSMg01no068_d11.g1 PHD_FILE: MSMg01no068_d11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:14:34 2005
(554 letters)
>mm_chr1_70619539_70620491
Length = 953
Score = 971 bits (502), Expect = 0.0
Identities = 541/554 (97%), Gaps = 1/554 (0%)
Strand = Plus / Minus
Query: 1 aacatattgttactactggcttcaatctaaatatagagagcctaatgtaagtcatattaa 60
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 753 aacatattgttactactggtttcaatctaaatatagagagcctaatgtaagtcatattaa 694
Query: 61 tcttttttcctccacaatatttcacaagaatactttacaaatatttttatcctatttgaa 120
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 693 tc-tttttcctccacaatatttcacaagaatactttacaaatatttttatcctatttgaa 635
Query: 121 tttttataaaggaaattaaatagagtaagattatttctaaaagataatgatcaaatcata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 634 tttttataaaggaaattaaatagagtaagattatttctaaaagataatgatcaaatcata 575
Query: 181 aatataaagctatattatccatacccttatttgaatagtgactgagaaaatttgaatcac 240
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 574 aatgtaaagctatattatccatacccttatttgaatagtgactgagaaaatttgaatcac 515
Query: 241 caatattcgtttctagctggttactgtgttttcaagtgataaatgcaatgagaaatcaaa 300
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 514 caatattcgtttctagctggttacagtgttttcaagtgataaatgcaatgagaaatcaaa 455
Query: 301 ttacctagttttcaagacactatatatgctcctcatttaagtttattaatactttgaaag 360
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 454 ttacctagttttcaagacactatatatgctcctcatttaagtttattaatacgttgaaag 395
Query: 361 ccagtcatgtagaattctgaagacatctcagaaatacctaagaagagatggtccatgaat 420
||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||
Sbjct: 394 ccagtcatgtagaattctgaaaacatctcagaaatatctaagaagagatggtccatgaat 335
Query: 421 tgggctctatttattacatgtatattacttatcttataaacagaatactatgagctattc 480
|||| |||||||||||||||||||||||||||||||| |||||||||||||||||||| |
Sbjct: 334 tgggatctatttattacatgtatattacttatcttatgaacagaatactatgagctatcc 275
Query: 481 atgaaatggtagctaatttatcaaatatcaaaaaactctatgggggggctatacattcta 540
||||||||||||||||||||||||||||||||||| ||||||||||| ||| ||||||||
Sbjct: 274 atgaaatggtagctaatttatcaaatatcaaaaaagtctatggggggcctacacattcta 215
Query: 541 tgccagaattctca 554
||||||||||||||
Sbjct: 214 tgccagaattctca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 554
Length of database: 953
Length adjustment: 10
Effective length of query: 544
Effective length of database: 943
Effective search space: 512992
Effective search space used: 512992
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
