Query= MSMg01no068_g10.b1 MSMg01no068_g10.b1 CHROMAT_FILE:
MSMg01no068_g10.b1 PHD_FILE: MSMg01no068_g10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:14:49 2005
(428 letters)
>mm_chr1_146018077_146018905
Length = 829
Score = 750 bits (388), Expect = 0.0
Identities = 418/428 (97%), Gaps = 1/428 (0%)
Strand = Plus / Minus
Query: 1 agattttatatgttctttgaaaattgactctctcaagaaattattttatatgactaaatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 628 agattttatatgttctttgaaaattgactctctcaagaaattattttatatgactaaatt 569
Query: 61 atatacctatatac-tatttttttttagaaaaaatgagcaggcatatctgttggatttgc 119
|||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 568 atatacctatatacttttttttttttagaaaaaatgagcaggcatatctgttggatttgt 509
Query: 120 aaggtgtgcagagatgaatctaagaggctcccttcaaagtaagtagcttttaaatgccat 179
||| | |||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 508 aagctatgcagagatgaatctaagaggctcccttcaaagtaagtagcttttaaatgtcat 449
Query: 180 ggccacttaaaagaattcttagtcacatgataaataggtacatatcttctttaatatatt 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 ggccacttaaaagaattcttagtcacatgataaataggtacatatcttctttaatatatt 389
Query: 240 ttgctctaaatatatatttctgagaaaataaaattttcatttacacatgagaaactccat 299
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 388 ttgctctaaatatatatttctaagaaaataaaattttcatttacacatgagaaactccat 329
Query: 300 cagagaagcaatcatgtgtcacgatttccatacttcatagtgtacacctgaaattttgct 359
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 328 cagagaagcaatcatgtgtcacgatttccatacttcatagtgtacacctgaaattttggt 269
Query: 360 agctttaatgctttagagatatggtacaaatgttcttttttattaaatattttcttcatt 419
||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||
Sbjct: 268 agctttaatgctttagagatatgttacaaacgttcttttttattaaatattttcttcatt 209
Query: 420 tacatttc 427
||||||||
Sbjct: 208 tacatttc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 428
Length of database: 829
Length adjustment: 9
Effective length of query: 419
Effective length of database: 820
Effective search space: 343580
Effective search space used: 343580
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no068_g10.g1 MSMg01no068_g10.g1 CHROMAT_FILE:
MSMg01no068_g10.g1 PHD_FILE: MSMg01no068_g10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:14:50 2005
(236 letters)
>mm_chr1_145855538_145856173
Length = 636
Score = 453 bits (234), Expect = e-132
Identities = 234/234 (100%)
Strand = Plus / Plus
Query: 1 ttcaagttgacacagttgtgctgtaaatatccaactctaaactcggagctaatggcacaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttcaagttgacacagttgtgctgtaaatatccaactctaaactcggagctaatggcacaa 260
Query: 61 gagttcggcaaacttcccagcttgtaaaagtgagatacttctgtctttcttttcataaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gagttcggcaaacttcccagcttgtaaaagtgagatacttctgtctttcttttcataaaa 320
Query: 121 tatgtttgtttaacagagcaggttggttgaatttcttgtccataattgggacacttgctt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tatgtttgtttaacagagcaggttggttgaatttcttgtccataattgggacacttgctt 380
Query: 181 tttattcttactgttgctgtttcactaaatttcactgttaagtgtaattactgg 234
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tttattcttactgttgctgtttcactaaatttcactgttaagtgtaattactgg 434
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 236
Length of database: 636
Length adjustment: 9
Effective length of query: 227
Effective length of database: 627
Effective search space: 142329
Effective search space used: 142329
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
