CAAAATTTGCGGCGCTAAACGACTCCTATTCCAAGAGGAGCCGCGGAATT
CTAGGTTTGCCAGGATACATAATAAGACCCTGTCCCATTTTTTTTTCCTT
ATCCACACGTGTGGATAAATAAAGATTTTGTGTCTGGCTAGGCAGCTGGG
CTTTGAGTCAGGCTGGAGAAAAACTAGGAATTATTGGTTTTAGAACTAGT
ACTAAGGATTTCATCTTTCCTTCAATCGGACCACAGTTCCTGAATCTTAC
ATACAATTAAGGCATGGGAGGGCTGTGCTGTGGCAACAGTGTTCCCAATG
TCTAATGTTCCCTTTCGCCTGTGTTTCTCTCCTGGCACTGTACTGTTTTA
GAAGAGGGGACATTTTTTTGATGGGCAGAGGATTACCAGTGTGAAGGAGA
CCTTCACCTTCTTTTCTTCTCTTTGGCTTTGCTTATCCTTTCTATCTTTT
TAAAAGAGATGCACACTTCTTATTTTTTAAAAAGATTTATTTATTTATCT
TATGTATATGAGCACACTGTATCTGTACAGATGGTTGTGAGCCATTGTGT
GGTTGCTGGCAATTGAACTCAGGACCTCTGCTAGCTCTGAGGCCCCTCTC
ACTCCAGCCCAAATATTTTACTTAATCGCTATATGCAAGTACACTACCGG
ATGTCCTCAGATATACCTGAAGAGGGCGTCCGATCCCATTACAGATGG

AATGCAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXTTACCCGCAAAATTCAAGTGTTAGCTTCGTCATCTGTGTCTTCT
ATCAATACCTTAGTGTCGCGAGCCTTGGATCTAGCGTGATCAGAGGAAAT
GAACATGTATGATCAGTCCCATGCAGTGCTGCTGGGTCCACTCTTCCCAC
TAGCAAGCACGCACACTACCCAGGAGCTATGTACTGCAAGTGGAGAGGTA
GGAACAGCAGTAGGCTGAATTAAAGACGGAGCAGTACCCGGAAACAAGGA
CTGAGTTTGAGCACTGTTACAGTGATAGCCAGGAGCCTCGGTCAAACTGT
TAGTGCTGCTGATTTACGAGGCTGTGCAGAGATTCTTGTACCGAATAAAA
ATGGGACTGGGTAACCCGACACTCGTTAGCCTCAACAGTGAAGGTAGTGT
TTCTGACAGGAGATCTGTTACTCCCACTTGACAGATGGTGAGGCTGACAT
TCATGAGGCTAAGGCTGTGCTAAGGCTGCATGAATCTATGACGTCTGAGC
TGAGACTCAGGTCTCACCTTAGATTCCCTGCACTCTTTGTACCTTAAGCC
TGTTCTTCTAACTGCCTTCCTCTGGCTGCCATCTAGATTCCCAGCGTTTC
CCTGGAAACCCCCTGAAATGAATCGACTATTACCCAAAGCCTCCCTCTT

Query= MSMg01no069_d13.b1 MSMg01no069_d13.b1 CHROMAT_FILE:
MSMg01no069_d13.b1 PHD_FILE: MSMg01no069_d13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:15:55 2005
         (447 letters)



>mm_chr1_157266039_157266885
          Length = 847

 Score =  859 bits (444), Expect = 0.0
 Identities = 444/444 (100%)
 Strand = Plus / Minus

                                                                       
Query: 1   ataataagaccctgtcccatttttttttccttatccacacgtgtggataaataaagattt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ataataagaccctgtcccatttttttttccttatccacacgtgtggataaataaagattt 542

                                                                       
Query: 61  tgtgtctggctaggcagctgggctttgagtcaggctggagaaaaactaggaattattggt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tgtgtctggctaggcagctgggctttgagtcaggctggagaaaaactaggaattattggt 482

                                                                       
Query: 121 tttagaactagtactaaggatttcatctttccttcaatcggaccacagttcctgaatctt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tttagaactagtactaaggatttcatctttccttcaatcggaccacagttcctgaatctt 422

                                                                       
Query: 181 acatacaattaaggcatgggagggctgtgctgtggcaacagtgttcccaatgtctaatgt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 acatacaattaaggcatgggagggctgtgctgtggcaacagtgttcccaatgtctaatgt 362

                                                                       
Query: 241 tccctttcgcctgtgtttctctcctggcactgtactgttttagaagaggggacatttttt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tccctttcgcctgtgtttctctcctggcactgtactgttttagaagaggggacatttttt 302

                                                                       
Query: 301 tgatgggcagaggattaccagtgtgaaggagaccttcaccttcttttcttctctttggct 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tgatgggcagaggattaccagtgtgaaggagaccttcaccttcttttcttctctttggct 242

                                                                       
Query: 361 ttgcttatcctttctatctttttaaaagagatgcacacttcttattttttaaaaagattt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ttgcttatcctttctatctttttaaaagagatgcacacttcttattttttaaaaagattt 182

                                   
Query: 421 atttatttatcttatgtatatgag 444
           ||||||||||||||||||||||||
Sbjct: 181 atttatttatcttatgtatatgag 158


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 447
Length of database: 847
Length adjustment: 10
Effective length of query: 437
Effective length of database: 837
Effective search space:   365769
Effective search space used:   365769
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no069_d13.g1 MSMg01no069_d13.g1 CHROMAT_FILE:
MSMg01no069_d13.g1 PHD_FILE: MSMg01no069_d13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:15:55 2005
         (434 letters)



>mm_chr1_157127938_157128772
          Length = 835

 Score =  795 bits (411), Expect = 0.0
 Identities = 429/435 (98%), Gaps = 1/435 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   attcaagtgttagcttcgtcatctgtgtcttctatcaataccttagtgtcgcgagccttg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attcaagtgttagcttcgtcatctgtgtcttctatcaataccttagtgtcgcgagccttg 260

                                                                       
Query: 61  gatctagcgtgatcagaggaaatgaacatgtatgatcagtcccatgcagtgctgctgggt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gatctagcgtgatcagaggaaatgaacatgtatgatcagtcccatgcagtgctgctgggt 320

                                                                       
Query: 121 ccactcttcccactagcaagcacgcacactacccaggagctatgtactgcaagtggagag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ccactcttcccactagcaagcacgcacactacccaggagctatgtactgcaagtggagag 380

                                                                       
Query: 181 gtaggaacagcagtaggctgaattaaagacggagcagtacccggaaacaagga-ctgagt 239
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 381 gtaggaacagcagtaggctgaattaaagacggagcagtacccggaaacaaggatctgagt 440

                                                                       
Query: 240 ttgagcactgttacagtgatagccaggagcctcggtcaaactgttagtgctgctgattta 299
           |||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 441 ttgagcactggtacagtgatagccaggagcctcggtcaaactgttagcgctgctgattta 500

                                                                       
Query: 300 cgaggctgtgcagagattcttgtaccgaataaaaatgggactgggtaacccgacactcgt 359
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ggaggctgtgcagagattcttgtaccgaataaaaatgggactgggtaacccgacactcgt 560

                                                                       
Query: 360 tagcctcaacagtgaaggtagtgtttctgacaggagatctgttactcccacttgacagat 419
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tagcctcaacagtgaaggcagtgtttctgacaggagatctgttactcccacttgacagat 620

                          
Query: 420 ggtgaggctgacatt 434
           || ||||||||||||
Sbjct: 621 ggggaggctgacatt 635


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 434
Length of database: 835
Length adjustment: 9
Effective length of query: 425
Effective length of database: 826
Effective search space:   351050
Effective search space used:   351050
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)