Query= MSMg01no069_l04.b1 MSMg01no069_l04.b1 CHROMAT_FILE:
MSMg01no069_l04.b1 PHD_FILE: MSMg01no069_l04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:16:31 2005
(375 letters)
>mm_chr1_129939916_129940690
Length = 775
Score = 594 bits (307), Expect = e-174
Identities = 316/319 (99%)
Strand = Plus / Minus
Query: 57 tagacttaaactttatacagcttaggatgaccttgaaccctgttctgccagcctctacct 116
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 775 tagacttaaactttatacagcttaggatgaccttgaaccctgttctgccagcctctacct 716
Query: 117 cataagtgtatattacaggcttgctccactatgtccaatttatatagtggtatggaatga 176
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 715 cataagtgtatattacaggcttgctccactatgtccaatttatatagtggcatggaatga 656
Query: 177 accctagacatctagggttcatctagataagcattctatctactgagcacactatatata 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 655 accctagacatctagggttcatctagataagcattctatctactgagcacactatatata 596
Query: 237 tatataatattttattaattctctgagaatttctttcagtatagtttgaatcctgccata 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 595 tatataatattttattaattctctgagaatttctttcagtatagtttgaatcctgccata 536
Query: 297 cccatctctactcacccaatttctaagcatattttttaaaggcctatttactcaaatttg 356
||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 535 cccatctctacccacccaatttctaagcatattttttaaaggcctatttagtcaaatttg 476
Query: 357 ttttgcccccatacttttg 375
|||||||||||||||||||
Sbjct: 475 ttttgcccccatacttttg 457
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 375
Length of database: 775
Length adjustment: 9
Effective length of query: 366
Effective length of database: 766
Effective search space: 280356
Effective search space used: 280356
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no069_l04.g1 MSMg01no069_l04.g1 CHROMAT_FILE:
MSMg01no069_l04.g1 PHD_FILE: MSMg01no069_l04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:16:31 2005
(158 letters)
>mm_chr1_129797163_129797720
Length = 558
Score = 275 bits (142), Expect = 1e-78
Identities = 153/158 (96%), Gaps = 3/158 (1%)
Strand = Plus / Plus
Query: 1 acttagttctttcatattgtaaactggagttttgtttgtatgtatgtctagtaaatgtgt 60
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||
Sbjct: 201 acttagttctttcatattgtaaactggagttttgtttgtatgtatgtgtagtaaatgcgt 260
Query: 61 atgtgtatcatgtgtgccatggtgtccttgtggatgctagaggagagctttgttaagtta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atgtgtatcatgtgtgccatggtgtccttgtggatgctagaggagagctttgttaagtta 320
Query: 121 gctttcttttttgtttttttttttttttatgggggttc 158
||||||||||||||||||||||||| ||||||||||
Sbjct: 321 gctttcttttttgtttttttttttt---atgggggttc 355
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 158
Length of database: 558
Length adjustment: 8
Effective length of query: 150
Effective length of database: 550
Effective search space: 82500
Effective search space used: 82500
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
