GCGCCGCTATACGACTCCTATTTCGAGAGAATCCGCGGAATTCTCTGTAT
AACATTCTTAAATGTCTGAAAGATATTTAAAAAATGTTCAACATTCTTAG
CCATCAGAAAAATTTAAATAAAAATTTCTTTGAGAGTCCATCTTTTACCT
GTTAGAATGGCTACAATCAGTTTTTTAAAAAGACAGTTTTTGCTGGTGAA
AATGTAGAGCAACAGGAACACTCCTCCATTGTTGGTGAGAGTACAAACTT
GTATAGCCACTATAAAAATCAATATTGTGGTTCTTCAGAACATTGGGAAT
TGATCTACCTTTGCCACTCTTGGATACCCAAGGGATACTTCACCTGACCA
CAAGGCCACTTGTTCATTGCTGCTTGTTTCAGAATAGGCAGACATTTCAA
ACAAACTTCATGTCCCTAAACAGAAAAATGGATAAAGAAACTGTGGTACA
TTTACACAATGGAATAATACTTAGCTGTTAAAAATGACATCATCAAAATT
GCAGGCAGATGGATGGAAGTAGACAAAATCATCCTGATGATGAAACTCAG
ACTCAGAATTTTAAATATATTGTTAGAATATATATTCTATATAATTCACT
TATATGTGGATATTATCCATTAAATTAATGATGATGATGATACAATCTAT
AGTCCCAGATAGA

NACGATGCAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXTTTCACCACATACACACAAACACTAA
TTGGATGCACTTAGGCAAATGCAGAGATTGAAACAGTGTTGGGCAGTGCC
ACACTGGCATGCTTTTGCCATGATGGAGCCCTGAACACAAAAGAAGGCAA
GCAAGCTATCTGAAAAGCTAAAGTAACAAGAAGCCAGATCCCCCACCCCA
ACCCCCCACCCCGCCTGTGAGCCCCAACTGCTTTGGTTTTTTTCATTTTA
GAGCAGGTAGCCTGCTAGCCAGCAAGCTTTCTAGTAAATTCTAAGCTGGG
GCTCAAAGGCAACATTGAAGTCATTGGTGAAACCCAGAGAGATTTGCCAA
GATCCTGCAGGGCAGGAACACTTGCAGGAAGAACAAGCTAGTACTAGGGT
GGAGGTTTATTTTAGAGTAATTGTCTAGTGCTGTCTTGGCTTTCTCTAGA
GAATGCCACGGGTTGTTCATTTGTACTGTTTTCTAAAACACTAAAAGGCA
TTTAAAAAATGGGAGTCATTGTTCCACAAGACAAAGTACACTTGAACAGG
TTTACAACTTGTATGCATATTCAGAATGTCTTCATAGATGTAGAAACAAA
CCAGCCAAAGAGAGGGAGAAAGGTTGA

Query= MSMg01no070_e17.g1 MSMg01no070_e17.g1 CHROMAT_FILE:
MSMg01no070_e17.g1 PHD_FILE: MSMg01no070_e17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:17:18 2005
         (529 letters)



>mm_chr1_106639658_106640586
          Length = 929

 Score =  934 bits (483), Expect = 0.0
 Identities = 519/531 (97%), Gaps = 4/531 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   tttcac-cacatacacacaaacactaattggatgcacttaggcaaatgcagagattgaaa 59
           |||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 201 tttcacacacatacacacaaacacgaattggatgcacttaggcaaatgcagagattgaaa 260

                                                                       
Query: 60  cagtgttgggcagtgccacactggcatgcttttgccatgatggagccctgaacacaaaag 119
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cagtgttgggcagtgccacactggcatgcttttgccatgatggagccctgaacacaaaag 320

                                                                       
Query: 120 aaggcaagcaagctatctgaaaagctaaagtaacaagaagccagatcccccaccccaacc 179
           ||||||||||||||| ||||||||| ||||||| |||||||||||||||||||||||| |
Sbjct: 321 aaggcaagcaagctagctgaaaagccaaagtaagaagaagccagatcccccaccccaa-c 379

                                                                       
Query: 180 ccccaccccg-cctgtgagccccaactgctttggtttttttcattttagagcaggtagcc 238
           |||||||||| ||||||| ||||||||||||||| |||||||||||||||||||||||||
Sbjct: 380 ccccaccccgccctgtgatccccaactgctttgg-ttttttcattttagagcaggtagcc 438

                                                                       
Query: 239 tgctagccagcaagctttctagtaaattctaagctggggctcaaaggcaacattgaagtc 298
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 tgctagccagcaagctttctagtaaattctaagctggggctcaaaggcaacattgaagtc 498

                                                                       
Query: 299 attggtgaaacccagagagatttgccaagatcctgcagggcaggaacacttgcaggaaga 358
           ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
Sbjct: 499 attggtgaaacccagagagatttgccaagatcctgcagggcaggaacacatgcaggaaaa 558

                                                                       
Query: 359 acaagctagtactagggtggaggtttattttagagtaattgtctagtgctgtcttggctt 418
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 acaagctagtactagggtggaggtttattttagagtaattgtctagtgctgtcttggctt 618

                                                                       
Query: 419 tctctagagaatgccacgggttgttcatttgtactgttttctaaaacactaaaaggcatt 478
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 tctctagagaatgccacgggttgttcatttgtactgttttctaaaacactaaaaggcatt 678

                                                              
Query: 479 taaaaaatgggagtcattgttccacaagacaaagtacacttgaacaggttt 529
           ||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 679 taaaaaatgggagtcattgttccacaagacaaagtacccttgaacaggttt 729


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 529
Length of database: 929
Length adjustment: 10
Effective length of query: 519
Effective length of database: 919
Effective search space:   476961
Effective search space used:   476961
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)