Query= MSMg01no070_f03.b1 MSMg01no070_f03.b1 CHROMAT_FILE:
MSMg01no070_f03.b1 PHD_FILE: MSMg01no070_f03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:17:20 2005
(421 letters)
>mm_chr1_62137900_62138720
Length = 821
Score = 808 bits (418), Expect = 0.0
Identities = 418/418 (100%)
Strand = Plus / Minus
Query: 4 ggaattcccattatcactggatttcttaatcctggattcacattcatgatgctatttaag 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ggaattcccattatcactggatttcttaatcctggattcacattcatgatgctatttaag 562
Query: 64 atgctaaaaataaaagctgtggctagctccagtttttgtaggcatgcatattaatttaaa 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 atgctaaaaataaaagctgtggctagctccagtttttgtaggcatgcatattaatttaaa 502
Query: 124 taatttccctttaattatatttaacacacattagaaatttagtaattataaaagaccttt 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 taatttccctttaattatatttaacacacattagaaatttagtaattataaaagaccttt 442
Query: 184 aattatcaacattcattattatcactattattaacatatattaaacacccacagtctgtt 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aattatcaacattcattattatcactattattaacatatattaaacacccacagtctgtt 382
Query: 244 aaatgctgcactcaagataaaaggcattaacctcgcgattccactgtgaccaagatggaa 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaatgctgcactcaagataaaaggcattaacctcgcgattccactgtgaccaagatggaa 322
Query: 304 gacaatcttttccttccagatagagtgcaaaattatacttgcttcgcctgacaatgagct 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gacaatcttttccttccagatagagtgcaaaattatacttgcttcgcctgacaatgagct 262
Query: 364 agtggatgagtcagggatcaaacctacttgtcttaaccaccagacaattccataaaca 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agtggatgagtcagggatcaaacctacttgtcttaaccaccagacaattccataaaca 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 421
Length of database: 821
Length adjustment: 9
Effective length of query: 412
Effective length of database: 812
Effective search space: 334544
Effective search space used: 334544
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no070_f03.g1 MSMg01no070_f03.g1 CHROMAT_FILE:
MSMg01no070_f03.g1 PHD_FILE: MSMg01no070_f03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:17:20 2005
(335 letters)
>mm_chr1_61962503_61963238
Length = 736
Score = 619 bits (320), Expect = 0.0
Identities = 329/332 (99%), Gaps = 1/332 (0%)
Strand = Plus / Plus
Query: 5 gaattca-tacactttcctagcctattaagaatctgtaagtgatcagtacttatacttaa 63
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaatacactttcctagcctattaagaatctgtaagtgatcagtacttatacttaa 264
Query: 64 aattattcctctgaaaatatgaaccatagttcctagtaactgatctgtaaattattcaca 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aattattcctctgaaaatatgaaccatagttcctagtaactgatctgtaaattattcaca 324
Query: 124 gctttgagaaaagcttttggctatacgtctagaaaggtatagctcacaggaataggcata 183
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 325 gctttgagaaaagcttttggctatacatctagaaaggtatagctcacaggaataggcata 384
Query: 184 tagacattcatagaatttgtagttccttgaagacaaggttttagcacgtaacccaagaag 243
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 385 tagacattcatagaatttgtagttccttgaagacaaggttttagcatgtaacccaagaag 444
Query: 244 aataatcctttatcagccactagcttttcccatgtgcacagcttttcaaattaagcaaaa 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 aataatcctttatcagccactagcttttcccatgtgcacagcttttcaaattaagcaaaa 504
Query: 304 ccttttcatatcaggtctactaaaagtgcaaa 335
||||||||||||||||||||||||||||||||
Sbjct: 505 ccttttcatatcaggtctactaaaagtgcaaa 536
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 335
Length of database: 736
Length adjustment: 9
Effective length of query: 326
Effective length of database: 727
Effective search space: 237002
Effective search space used: 237002
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
