Query= MSMg01no071_d05.b1 MSMg01no071_d05.b1 CHROMAT_FILE:
MSMg01no071_d05.b1 PHD_FILE: MSMg01no071_d05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:18:31 2005
(392 letters)
>mm_chr1_156607500_156608291
Length = 792
Score = 733 bits (379), Expect = 0.0
Identities = 388/391 (99%)
Strand = Plus / Plus
Query: 2 ggaattccagaaagttttcccagatgatatttgatgtaaaatgcctttgttaatctagcc 61
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 ggaattccagaaagtttttccagatgatatttgatgtaaaatgcctttgttaatctagcc 261
Query: 62 ccagaaaaatgttcggcaaaagtttcatctctcatcagtgtgccataaataagattagtt 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 ccagaaaaatgttcggcaaaagtttcatctctcatcagtgtgccataaataagattagtt 321
Query: 122 ggaggacttactgaattcctgcactaaggtgggtacagaattacacatattacatcaaaa 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 ggaggacttactgaattcctgcactaaggtgggtacagaattacacatattacatcaaaa 381
Query: 182 ttaaatacagaaccccattaaaaattgatgagaataaaatgggttctggagtttagaggg 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 ttaaatacagaaccccattaaaaattgatgagaataaaatgggttctggagtttagaggg 441
Query: 242 tctgcaatcaaggcttgcttcagcacttacgctggagggactccaagaacaagttgtctg 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 tctgcaatcaaggcttgcttcagcacttacgctggagggactccaagaacaagttgtctg 501
Query: 302 ggagcagggagcagaacccagtcctactgcagcagtgcatcccattctcataactgtatg 361
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 502 ggagcagggagcagaacccagtcctactgcagcagtgcatcccattctcagaactgtatg 561
Query: 362 tcttcctcagcctgatatgggacattgagat 392
|||||||||| ||||||||||||||||||||
Sbjct: 562 tcttcctcagtctgatatgggacattgagat 592
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 392
Length of database: 792
Length adjustment: 9
Effective length of query: 383
Effective length of database: 783
Effective search space: 299889
Effective search space used: 299889
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no071_d05.g1 MSMg01no071_d05.g1 CHROMAT_FILE:
MSMg01no071_d05.g1 PHD_FILE: MSMg01no071_d05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:18:31 2005
(234 letters)
>mm_chr1_156778302_156778937
Length = 636
Score = 441 bits (228), Expect = e-128
Identities = 234/236 (99%), Gaps = 2/236 (0%)
Strand = Plus / Minus
Query: 1 tttttgttctacc-attattaggtgcccagtagtttggattc-ccagctttaactatgaa 58
||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 436 tttttgttctaccaattattaggtgcccagtagtttggattcaccagctttaactatgaa 377
Query: 59 tttatctatttcttttttcagtgatacacacttttgcttttagtgtattaaaattcagtt 118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 tttatctatttcttttttcagtgatacacacttttgcttttagtgtattaaaattcagtt 317
Query: 119 ctaataaaacacacactgaagatgccatctttcatcattatggtatgtgcctatttattc 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 ctaataaaacacacactgaagatgccatctttcatcattatggtatgtgcctatttattc 257
Query: 179 ttgaaaatattccttgttctgatatgaacataagccttccaggtgtattttgattt 234
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 ttgaaaatattccttgttctgatatgaacataagccttccaggtgtattttgattt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 234
Length of database: 636
Length adjustment: 9
Effective length of query: 225
Effective length of database: 627
Effective search space: 141075
Effective search space used: 141075
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
