Query= MSMg01no071_n03.b1 MSMg01no071_n03.b1 CHROMAT_FILE:
MSMg01no071_n03.b1 PHD_FILE: MSMg01no071_n03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:19:21 2005
(427 letters)
>mm_chr1_189672233_189673058
Length = 826
Score = 748 bits (387), Expect = 0.0
Identities = 414/423 (97%), Gaps = 2/423 (0%)
Strand = Plus / Plus
Query: 5 gaattcatgccaattctaacaaaacctttttcagaaaatacatgaagatagaatatttgc 64
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
Sbjct: 206 gaattcatgccaattctaacaaaacctctttcagaaaatacatgaagatagaatatttcc 265
Query: 65 gaatttgacttatgacttcccaagagtgactttgacttctaaagaggaactccaaagcag 124
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 266 gaatttgacttatgacttcccaagagtgactttgacttctaaagagggactccaaagcag 325
Query: 125 aaaccaggtaaacctgagaataaaacaaaatggaataacaacaaaaaaaaggaaaatgat 184
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 326 aaaccaggtaaacctgagaataaaacaaaatggaataacaacaaaaaaa-ggaaaatgat 384
Query: 185 aagataaagaaaactacaaacctttctgaagaactacaaagtggctttgcaaaactggct 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 aagataaagaaaactacaaacctttctgaagaactacaaagtggctttgcaaaactggct 444
Query: 245 cagtactcggaatttccacaagtcattctaacattagtgttaaaatattccacaaattca 304
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 445 cagtactcggaatttccacaagtcattctaacattagtgttaaaatatttcacaaattca 504
Query: 305 tactagttgatacagaaaataatatttgctgaattttcaagtctcatggggaaaaaagtg 364
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 505 tactagttgatacagaaaataatatttgctgaattttcaagtctcatgggaaaaaaagtg 564
Query: 365 cctttgaaataagaatagaaaaaaaaaacctacctaaaatgttaaacacatctctaaaat 424
|||||||| |||||||||||||||||| | ||||||||||||||||||||||||||||||
Sbjct: 565 cctttgaagtaagaatagaaaaaaaaatc-tacctaaaatgttaaacacatctctaaaat 623
Query: 425 tag 427
|||
Sbjct: 624 tag 626
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 427
Length of database: 826
Length adjustment: 9
Effective length of query: 418
Effective length of database: 817
Effective search space: 341506
Effective search space used: 341506
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no071_n03.g1 MSMg01no071_n03.g1 CHROMAT_FILE:
MSMg01no071_n03.g1 PHD_FILE: MSMg01no071_n03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:19:21 2005
(200 letters)
>mm_chr1_189806000_189806599
Length = 600
Score = 387 bits (200), Expect = e-112
Identities = 200/200 (100%)
Strand = Plus / Minus
Query: 1 tctcctccatatggacactaagaaaggtcatttcctcccaggaggcaacttgtccctcca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 tctcctccatatggacactaagaaaggtcatttcctcccaggaggcaacttgtccctcca 341
Query: 61 ttgttttgcattttcatatctatttatgcatggttttacttctctcacgaacctgcggtc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 ttgttttgcattttcatatctatttatgcatggttttacttctctcacgaacctgcggtc 281
Query: 121 ttgatgaaagtcttatctctgatgtccacaacagagcttcggacctactagagcatcagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 ttgatgaaagtcttatctctgatgtccacaacagagcttcggacctactagagcatcagt 221
Query: 181 acttcagctccttattaagt 200
||||||||||||||||||||
Sbjct: 220 acttcagctccttattaagt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 200
Length of database: 600
Length adjustment: 8
Effective length of query: 192
Effective length of database: 592
Effective search space: 113664
Effective search space used: 113664
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
