Query= MSMg01no072_b12.b1 MSMg01no072_b12.b1 CHROMAT_FILE:
MSMg01no072_b12.b1 PHD_FILE: MSMg01no072_b12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:19:43 2005
(429 letters)
>mm_chr1_163748930_163749761
Length = 832
Score = 737 bits (381), Expect = 0.0
Identities = 407/417 (97%), Gaps = 4/417 (0%)
Strand = Plus / Minus
Query: 17 agaaatccttatgaggcctgcaaaaccttaaatattatccaaccctttaaagaaaaaaaa 76
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 832 agaaatacttatgaggcctgcaaaaccttaaatattatccaaccctttaaagaaaaaaaa 773
Query: 77 tgtgcagatacttggatgatagtcattatttactgagctgctcatgcatgccaggcacag 136
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 772 tgtgcagatacttggatgatagtcattatttactgagctgctcatgcatgccaggcacag 713
Query: 137 ttcaagcactgtttatataatcctcttacaacctagcagtggtaat-atctctttttaaa 195
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 712 ttcaagcactgtttatataatcctcttacaacctagcagtggtaataatctctttttaaa 653
Query: 196 aaatgaagacacagacagagtctgtacttagatgtcccagcagatagtaggcactgctgt 255
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 652 aaatgaagactcagacagagtctgtacttagatgtcccagcagatagtaggcactgctgt 593
Query: 256 gtatcttcctaggatt---ccccccccctttgcctataaagtctgattttcttttttacc 312
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 592 gtatcttcctaggattcccccccccccctttgcctataaagtctgattttcttttttacc 533
Query: 313 tctcaagttacataatatttattttgactagcagcaattgtctgtagtagaatttcagat 372
|||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 532 tctcaatttacataatatttattttgactagcagtaattgtctgtagtagaatttcagat 473
Query: 373 tactgcaaagtatcattggatttaatcctaacttcagtatttactattttgtaattt 429
|| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 472 tagtgcaaagtagcattggatttaatcctaacttcagtatttactattttgtaattt 416
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 429
Length of database: 832
Length adjustment: 9
Effective length of query: 420
Effective length of database: 823
Effective search space: 345660
Effective search space used: 345660
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no072_b12.g1 MSMg01no072_b12.g1 CHROMAT_FILE:
MSMg01no072_b12.g1 PHD_FILE: MSMg01no072_b12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:19:43 2005
(481 letters)
>mm_chr1_163638442_163639322
Length = 881
Score = 922 bits (477), Expect = 0.0
Identities = 480/481 (99%)
Strand = Plus / Plus
Query: 1 atgccacagatgaagcagcgaaccactgaaatggtcattgggcaatcacatggttccaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atgccacagatgaagcagcgaaccactgaaatggtcattgggcaatcacatggttccaat 260
Query: 61 tgtggtctctgttaaatataacaagatgaattgggtcagaggagaagtgacaaaatctag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgtggtctctgttaaatataacaagatgaattgggtcagaggagaagtgacaaaatctag 320
Query: 121 gcaagttgctaaaaaaggaaaaagaagaaatacaggtgcagggctcagtagcctgtgtcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gcaagttgctaaaaaaggaaaaagaagaaatacaggtgcagggctcagtagcctgtgtcc 380
Query: 181 tgtgtaagggcagggcgggatgagtcacagatatcctttagttaagtgttttaaacactc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgtgtaagggcagggcgggatgagtcacagatatcctttagttaagtgttttaaacactc 440
Query: 241 cgtgaatagtactgggaagaagaagcaggtctgggagatgtcagagcatcatttgttctt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cgtgaatagtactgggaagaagaagcaggtctgggagatgtcagagcatcatttgttctt 500
Query: 301 ttgtaaacatagaattgtctttttaaaaactactatcccatacaggagagatgtcagtaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttgtaaacatagaattgtctttttaaaaactactatcccatacaggagagatgtcagtaa 560
Query: 361 aagatgcatatgtaaattcagtgccctaaagaaacattagaaccagagataaaaagttga 420
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gagatgcatatgtaaattcagtgccctaaagaaacattagaaccagagataaaaagttga 620
Query: 421 gtgtcctcatctggagatggcacttaagaccaaagaattggatcacatcacctaaggata 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gtgtcctcatctggagatggcacttaagaccaaagaattggatcacatcacctaaggata 680
Query: 481 g 481
|
Sbjct: 681 g 681
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 481
Length of database: 881
Length adjustment: 10
Effective length of query: 471
Effective length of database: 871
Effective search space: 410241
Effective search space used: 410241
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
