Query= MSMg01no072_g08.b1 MSMg01no072_g08.b1 CHROMAT_FILE:
MSMg01no072_g08.b1 PHD_FILE: MSMg01no072_g08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:20:08 2005
(545 letters)
>mm_chr1_70606217_70607163
Length = 947
Score = 557 bits (288), Expect = e-163
Identities = 318/328 (96%), Gaps = 2/328 (0%)
Strand = Plus / Minus
Query: 1 ttattttcccttgagagg-cttgaaagacgcccccttttggactgtc-aaaatttgctac 58
|||||||||||||||||| ||||||||||||||| |||||||||||| ||||||||| ||
Sbjct: 528 ttattttcccttgagaggccttgaaagacgcccctttttggactgtcaaaaatttgcgac 469
Query: 59 tctgagatttgtgcaacgtaatctgtattaactacaacattgttaatcatttccaaaaag 118
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 468 tctgagatttgtgcaacgtagtctgtattaactacaacattgttaatcatttccaaaaag 409
Query: 119 gaaacatctcttcctcatatttatatttctggtcaatattagaagaagtgtttaacttaa 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 408 gaaacatctcttcctcatatttatatttctggtcaatattagaagaagtgtttaatttaa 349
Query: 179 ctagcttaaaatatataattaggaatacatgttttattataatggacacatcttttggta 238
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 348 gtagcttaaaatatataattaggaatacatgttttattataatggacacatcttttggta 289
Query: 239 ggggaagtgcttgatcttgtgtactttaaatcctagcttcagaatcactctaattgcttt 298
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 288 ggggaagtgcttgatcttgtatactttaaatcctagcttcagaatcactctaattgcttt 229
Query: 299 aaattctactgctaaatgattttctctt 326
||| |||||||||||||| |||||||||
Sbjct: 228 aaactctactgctaaatggttttctctt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 545
Length of database: 947
Length adjustment: 10
Effective length of query: 535
Effective length of database: 937
Effective search space: 501295
Effective search space used: 501295
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no072_g08.g1 MSMg01no072_g08.g1 CHROMAT_FILE:
MSMg01no072_g08.g1 PHD_FILE: MSMg01no072_g08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:20:08 2005
(532 letters)
>mm_chr1_70486189_70487120
Length = 932
Score = 1013 bits (524), Expect = 0.0
Identities = 530/532 (99%)
Strand = Plus / Plus
Query: 1 ataacctgaaattcttccatggaggcaatattcacattatgaaatatgacaaatgaaaca 60
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ataacttgaaattcttccatggaggcaatattcacattatgaaatatgacaaatgaaaca 260
Query: 61 cgttagagagctttgttttttaatatcaccggtcaacagcattgaatacacaaaccttgg 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgttagagagctttgttttttaatatcaccggtcaacagcattgaatacacaaaccttgg 320
Query: 121 agtttgagcagcactggacaaggtcatttttctcagacatgttagaattccacaggctgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agtttgagcagcactggacaaggtcatttttctcagacatgttagaattccacaggctgc 380
Query: 181 taatgagcctgaagtcaatgtgcaatactgatacagggactcttaattggagcttcttag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 taatgagcctgaagtcaatgtgcaatactgatacagggactcttaattggagcttcttag 440
Query: 241 ggaaatccctttctctgttaaaatatgcatcttaaataaggtttctgcatggctcctatg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ggaaatccctttctctgttaaaatatgcatcttaaataaggtttctgcatggctcctatg 500
Query: 301 tatctagatgattgatgactgagtccttaaaacagctgctcctggggtgtcccttaattc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tatctagatgattgatgactgagtccttaaaacagctgctcctggggtgtcccttaattc 560
Query: 361 ccaagttataatagaaaagatctgggagtcatgaaaaatgatttccagactatgagacat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ccaagttataatagaaaagatctgggagtcatgaaaaatgatttccagactatgagacat 620
Query: 421 aatcacagaacatgtaaaaaattagcatggcagaatttcagaaccatgatggattactgc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aatcacagaacatgtaaaaaattagcatggcagaatttcagaaccatgatggattactgc 680
Query: 481 tgacctttggtgccttcattctccccatatgtgtgtgactgtcttgtactta 532
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tgacctttggtgccttcattctccccatatgtgtgtgactgtcttgtactta 732
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 532
Length of database: 932
Length adjustment: 10
Effective length of query: 522
Effective length of database: 922
Effective search space: 481284
Effective search space used: 481284
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
