Query= MSMg01no073_h10.b1 MSMg01no073_h10.b1 CHROMAT_FILE:
MSMg01no073_h10.b1 PHD_FILE: MSMg01no073_h10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:21:32 2005
(182 letters)
>mm_chr1_167526031_167526614
Length = 584
Score = 321 bits (166), Expect = 1e-92
Identities = 179/184 (97%), Gaps = 2/184 (1%)
Strand = Plus / Plus
Query: 1 cttaaactcagagacccacctatct--gcttcccaagctgaaaatactcactcccaaccc 58
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 201 cttaaactcagagacccacctatctctgcttcccaagctgaaaatactcactcccaaccc 260
Query: 59 ctagcactccctgagaggggacacctgccttttccgggtgcttacaaactattggtaaaa 118
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 261 ctagcactccctgagaggggacacctgccttttccgggtgcttacaaactattggcaaaa 320
Query: 119 ctctatttccaggatttacttcactggtttttcaaggccaaatatgaaagttaatctatg 178
||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||
Sbjct: 321 ctctatttccaggatttacttcactgggttttcaaggccaaatatgaaagttaaactatg 380
Query: 179 tgtt 182
||||
Sbjct: 381 tgtt 384
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 182
Length of database: 584
Length adjustment: 8
Effective length of query: 174
Effective length of database: 576
Effective search space: 100224
Effective search space used: 100224
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no073_h10.g1 MSMg01no073_h10.g1 CHROMAT_FILE:
MSMg01no073_h10.g1 PHD_FILE: MSMg01no073_h10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:21:32 2005
(189 letters)
>mm_chr1_167655062_167655650
Length = 589
Score = 350 bits (181), Expect = e-101
Identities = 187/189 (98%)
Strand = Plus / Minus
Query: 1 tccacagtgccccagcttcccttacctcctcccatgcccccggccacatccctgctccag 60
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 389 tccacagtgccccagcttcccttacctcctcccatgcccctggccacatccctgctccag 330
Query: 61 gatgtgggagttatcctcatctagggctctccatcaggctggtggaccaccggaggtgag 120
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 gatgtgggagttagcctcatctagggctctccatcaggctggtggaccaccggaggtgag 270
Query: 121 gctgggtgcggagggaatcctgaccacagcagtggcaccctggatcccttgagacagcag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 gctgggtgcggagggaatcctgaccacagcagtggcaccctggatcccttgagacagcag 210
Query: 181 gagatgaga 189
|||||||||
Sbjct: 209 gagatgaga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 189
Length of database: 589
Length adjustment: 8
Effective length of query: 181
Effective length of database: 581
Effective search space: 105161
Effective search space used: 105161
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
