Query= MSMg01no073_h17.b1 MSMg01no073_h17.b1 CHROMAT_FILE:
MSMg01no073_h17.b1 PHD_FILE: MSMg01no073_h17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:21:33 2005
(203 letters)
>mm_chr1_39747530_39748133
Length = 604
Score = 366 bits (189), Expect = e-106
Identities = 198/201 (98%), Gaps = 1/201 (0%)
Strand = Plus / Minus
Query: 4 ggag-aatcatttcaagtagaattgtgtgctctggccctagcgggtccctcttctgccag 62
|||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 308 ggagaaatcatttcaagtagaattgtgtgctctggccctagtgggtccctcttctgccag 249
Query: 63 tcagcactgtgaggagggcccgagaccctttacccttccgggtttttttgttttgttttg 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 tcagcactgtgaggagggcccgagaccctttacccttccgggtttttttgttttgttttg 189
Query: 123 tttttgtttttttgtttttttgggtttttttagcctgaaatttgtcattcagaaatgaag 182
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 188 tttttgtttttttgtttttttgggtttttttagtctgaaatttgtcattcagaaatgaag 129
Query: 183 tcagtaacctgcattttcctg 203
|||||||||||||||||||||
Sbjct: 128 tcagtaacctgcattttcctg 108
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 203
Length of database: 604
Length adjustment: 8
Effective length of query: 195
Effective length of database: 596
Effective search space: 116220
Effective search space used: 116220
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no073_h17.g1 MSMg01no073_h17.g1 CHROMAT_FILE:
MSMg01no073_h17.g1 PHD_FILE: MSMg01no073_h17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:21:33 2005
(277 letters)
>mm_chr1_39585062_39585737
Length = 676
Score = 513 bits (265), Expect = e-150
Identities = 274/277 (98%), Gaps = 1/277 (0%)
Strand = Plus / Plus
Query: 1 accacaaagaagtagggattttgaaaaaagaacaattagtcaaattaaaaaaaaaatcca 60
|||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||
Sbjct: 201 accacaaagaagtagggattttgaaaaaagaacaattagtcaaatttaaaaaaaa-tcca 259
Query: 61 gctttaacaaagttcgatctgatctgtgaatggggacttgaaatcagccattcaggcaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 gctttaacaaagttcgatctgatctgtgaatggggacttgaaatcagccattcaggcaca 319
Query: 121 aagtgggttgggaattgttgttattctaatgttgattgaactttgtctgaatgtgaacaa 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 320 aagtgggttgggaattgttgttattctaatgttgattgaactttgtctgaatgtgaacca 379
Query: 181 agttaaagagcaccatgaaaagaagaagtaatgtgaaggttgtctttagaggaaaagata 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 agttaaagagcaccatgaaaagaagaagtaatgtgaaggttgtctttagaggaaaagata 439
Query: 241 tacttgagcatttagtctttcatctggctctcgactg 277
|||||||||||||||||||||||||||||||||||||
Sbjct: 440 tacttgagcatttagtctttcatctggctctcgactg 476
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 277
Length of database: 676
Length adjustment: 9
Effective length of query: 268
Effective length of database: 667
Effective search space: 178756
Effective search space used: 178756
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
