Query= MSMg01no074_c17.b1 MSMg01no074_c17.b1 CHROMAT_FILE:
MSMg01no074_c17.b1 PHD_FILE: MSMg01no074_c17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:22:27 2005
(246 letters)
>mm_chr1_134954399_134955044
Length = 646
Score = 422 bits (218), Expect = e-122
Identities = 239/246 (97%), Gaps = 2/246 (0%)
Strand = Plus / Minus
Query: 2 agccttgactgtgtcgg-tgagtagcggaggacttgcccagcatataggaccctttgcat 60
|||||||||||||| || |||||||||||||||||||||||| ||||||| ||||||||
Sbjct: 446 agccttgactgtgt-ggctgagtagcggaggacttgcccagcgtataggaggctttgcat 388
Query: 61 ttgattccccagcactggatgggaaagggctaagagcaaggtgccagttaggtctcagaa 120
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 387 ttgattccccagcactggatgggaaagggcaaagagcaaggtgccagttaggtctcagaa 328
Query: 121 gacagggaaagcactgacagccaggttcccctccctgtcttcacacaccaatctgttctt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 gacagggaaagcactgacagccaggttcccctccctgtcttcacacaccaatctgttctt 268
Query: 181 tttctgcttaagcatttctaagtactgctgctatcaatacttcagctcggatctcctaag 240
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 tttctgcttaagcatttcgaagtactgctgctatcaatacttcagctcggatctcctaag 208
Query: 241 tagcag 246
||||||
Sbjct: 207 tagcag 202
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 246
Length of database: 646
Length adjustment: 9
Effective length of query: 237
Effective length of database: 637
Effective search space: 150969
Effective search space used: 150969
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no074_c17.g1 MSMg01no074_c17.g1 CHROMAT_FILE:
MSMg01no074_c17.g1 PHD_FILE: MSMg01no074_c17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:22:27 2005
(276 letters)
>mm_chr1_134817465_134818143
Length = 679
Score = 476 bits (246), Expect = e-139
Identities = 269/278 (96%), Gaps = 3/278 (1%)
Strand = Plus / Plus
Query: 1 tgccggcttctcccagttccacagcccctgcggggaccaagctgcaccctacaatgggat 60
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 201 tgccggcttctcccagttccacagcccctgcggggaccaagctgcacaatacaatgggat 260
Query: 61 ttaataaaatgcctttaactcacaaagtctgtctgctgccagctccttaattaaattgcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttaataaaatgcctttaactcacaaagtctgtctgctgccagctccttaattaaattgcc 320
Query: 121 caactctctctgcaatggcagcacgaactcccgcgtctaaagagcacggcgttgctatgg 180
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 321 caactctctctgcaatggcagcacgaactcccgcgtctaaagagcacggtgttgctatgg 380
Query: 181 tattcgcgccagggcaggctcatgtcaggctgctgaagagcatgcagatgagcagctctt 240
|||||||||||||||||||||| | ||||||||| |||||||||||||||||||||||||
Sbjct: 381 tattcgcgccagggcaggctcagggcaggctgctaaagagcatgcagatgagcagctctt 440
Query: 241 cctgcctccaccggcg---ccagtgacatccttccagc 275
|||||||||||||||| |||||||||||||||||||
Sbjct: 441 cctgcctccaccggcggcgccagtgacatccttccagc 478
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 276
Length of database: 679
Length adjustment: 9
Effective length of query: 267
Effective length of database: 670
Effective search space: 178890
Effective search space used: 178890
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
