Query= MSMg01no074_d18.b1 MSMg01no074_d18.b1 CHROMAT_FILE:
MSMg01no074_d18.b1 PHD_FILE: MSMg01no074_d18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:22:32 2005
(496 letters)
>mm_chr1_156607521_156608416
Length = 896
Score = 959 bits (496), Expect = 0.0
Identities = 496/496 (100%)
Strand = Plus / Plus
Query: 1 cagatgatatttgatgtaaaatgcctttgttaatctagccccagaaaaatgttcggcaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cagatgatatttgatgtaaaatgcctttgttaatctagccccagaaaaatgttcggcaaa 260
Query: 61 agtttcatctctcatcagtgtgccataaataagattagttggaggacttactgaattcct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agtttcatctctcatcagtgtgccataaataagattagttggaggacttactgaattcct 320
Query: 121 gcactaaggtgggtacagaattacacatattacatcaaaattaaatacagaaccccatta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gcactaaggtgggtacagaattacacatattacatcaaaattaaatacagaaccccatta 380
Query: 181 aaaattgatgagaataaaatgggttctggagtttagagggtctgcaatcaaggcttgctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaaattgatgagaataaaatgggttctggagtttagagggtctgcaatcaaggcttgctt 440
Query: 241 cagcacttacgctggagggactccaagaacaagttgtctgggagcagggagcagaaccca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cagcacttacgctggagggactccaagaacaagttgtctgggagcagggagcagaaccca 500
Query: 301 gtcctactgcagcagtgcatcccattctcagaactgtatgtcttcctcagtctgatatgg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gtcctactgcagcagtgcatcccattctcagaactgtatgtcttcctcagtctgatatgg 560
Query: 361 gacattgagataatggtcctgccctccacagactgctcatctcctctatctgtaaaacct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gacattgagataatggtcctgccctccacagactgctcatctcctctatctgtaaaacct 620
Query: 421 ctgtacttgttttctttagcatctcactctgcttaaaaatatatatcaacactcaaaaca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ctgtacttgttttctttagcatctcactctgcttaaaaatatatatcaacactcaaaaca 680
Query: 481 tgtttaaggggctggg 496
||||||||||||||||
Sbjct: 681 tgtttaaggggctggg 696
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 496
Length of database: 896
Length adjustment: 10
Effective length of query: 486
Effective length of database: 886
Effective search space: 430596
Effective search space used: 430596
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no074_d18.g1 MSMg01no074_d18.g1 CHROMAT_FILE:
MSMg01no074_d18.g1 PHD_FILE: MSMg01no074_d18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:22:32 2005
(479 letters)
>mm_chr1_156778390_156779269
Length = 880
Score = 677 bits (350), Expect = 0.0
Identities = 356/358 (99%), Gaps = 1/358 (0%)
Strand = Plus / Minus
Query: 1 attcttgatctttttgttcta-caattattaggtgcccagtagtttggattcaccagctt 59
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 358 attcttgatctttttgttctaccaattattaggtgcccagtagtttggattcaccagctt 299
Query: 60 taactatgaatttatctatttcttttttcagtgatacacacttttgcttttagtgtatta 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 taactatgaatttatctatttcttttttcagtgatacacacttttgcttttagtgtatta 239
Query: 120 aaattcagttctaataaaacacacactgaagatgccatctttcatcattatggtatgtgc 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 238 aaattcagttctaataaaacacacactgaagatgccatctttcatcattatggtatgtgc 179
Query: 180 ctatttattcttgaaaatattccttgttctgatatgaacataagccttccaggtgtattt 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 178 ctatttattcttgaaaatattccttgttctgatatgaacataagccttccaggtgtattt 119
Query: 240 tgatttgttcaatttatttttagatgtctttagttttgatttatgatttgatccgtagta 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118 tgatttgttcaatttatttttagatgtctttagttttgatttatgatttgatccgtagta 59
Query: 300 gcagcatatactctgcttttttgatgtgtctggctaccttcgccttttcattaatcta 357
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 58 gcagcatatactctgcttttttgatgtgtctggctacctttgccttttcattaatcta 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 479
Length of database: 880
Length adjustment: 10
Effective length of query: 469
Effective length of database: 870
Effective search space: 408030
Effective search space used: 408030
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
